The discernible and hidden effects of clonality on the genotypic and genetic states of populations: improving our estimation of clonal rates (doi:10.15454/FEQ1Z6)

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Document Description

Citation

Title:

The discernible and hidden effects of clonality on the genotypic and genetic states of populations: improving our estimation of clonal rates

Identification Number:

doi:10.15454/FEQ1Z6

Distributor:

Portail Data INRAE

Date of Distribution:

2021-05-12

Version:

1

Bibliographic Citation:

Solenn Stoeckel, 2021, "The discernible and hidden effects of clonality on the genotypic and genetic states of populations: improving our estimation of clonal rates", https://doi.org/10.15454/FEQ1Z6, Portail Data INRAE, V1

Study Description

Citation

Title:

The discernible and hidden effects of clonality on the genotypic and genetic states of populations: improving our estimation of clonal rates

Identification Number:

doi:10.15454/FEQ1Z6

Authoring Entity:

Solenn Stoeckel (INRAE - Institut National de la Recherche Agronomique)

Distributor:

Portail Data INRAE

Access Authority:

Solenn Stoeckel

Depositor:

Glais, Isabelle

Date of Deposit:

2021-05-12

Study Scope

Keywords:

Biodiversity and Ecology, Genetic Resource, Omics

Abstract:

Partial clonality is widespread across the tree of life, but most population genetics models are designed for exclusively clonal or sexual organisms. This gap hampers our understanding of the influence of clonality on evolutionary trajectories and the interpretation of population genetics data. We performed forward simulations of diploid populations at increasing rates of clonality (c), analysed their relationships with genotypic (clonal richness, R, and distribution of clonal sizes, Pareto β) and genetic (FIS and linkage disequilibrium) indices, and tested predictions of c from population genetics data through supervised machine learning. Here are the numerical results form those simulations.

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Citation

Identification Number:

1902.09365v4

Bibliographic Citation:

Stoeckel, S., Porro, B., and Arnaud-Haond, S. (2019). The discernible and hidden effects of clonality on the genotypic and genetic states of populations: improving our estimation of clonal rates. ArXiv:1902.09365 [q-Bio] v4 peer-reviewed and recommended by Peer Community in Evolutionary Biology. Retrieved from http://arxiv.org/abs/1902.09365v4