Meloidogyne incognita Interproscan annotation (ICPSR doi:10.15454/9BFFKG)

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Document Description

Citation

Title:

Meloidogyne incognita Interproscan annotation

Identification Number:

doi:10.15454/9BFFKG

Distributor:

Portail Data INRAE

Date of Distribution:

2020-08-18

Version:

1

Bibliographic Citation:

Danchin, Etienne, 2020, "Meloidogyne incognita Interproscan annotation", https://doi.org/10.15454/9BFFKG, Portail Data INRAE, V1

Study Description

Citation

Title:

Meloidogyne incognita Interproscan annotation

Identification Number:

doi:10.15454/9BFFKG

Authoring Entity:

Danchin, Etienne (INRA - Institut National de la Recherche Agronomique)

Distributor:

Portail Data INRAE

Access Authority:

Danchin, Etienne

Depositor:

Danchin, Etienne

Date of Deposit:

2020-03-26

Study Scope

Keywords:

Omics, Plant Health and Pathology

Abstract:

Interproscan annotation on the 43,718 predicted proteins in the genome of the root-knot nematode Meloidogyne incognita (Blanc-Mathieu et al. 2017, PLoS Genetics). <br> vesrion used: interproscan-5.29-68.0 <br> options used: <br> -dp Disables use of the precalculated match lookup service = all match calculations are run locally. <br> -iprlookup lookup of corresponding InterPro annotation <br> -goterms lookup of corresponding Gene Ontology annotation <br> -pa lookup of corresponding Pathway annotation <br> -f TSV format the results in tab-separated values <br>

Kind of Data:

Dataset

Methodology and Processing

Sources Statement

Data Access

Notes:

CC0 Waiver

Other Study Description Materials

Other Study-Related Materials

Label:

MincV3-Interproscan.tsv

Text:

M. incognita V3 Interproscan annotation, tab-separated values

Notes:

text/tsv