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Part 1: Document Description
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Citation |
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Title: |
Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019) |
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Identification Number: |
doi:10.15454/EORHL8 |
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Distributor: |
Portail Data INRAE |
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Date of Distribution: |
2018-06-25 |
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Version: |
1 |
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Bibliographic Citation: |
Loudet, Olivier, 2018, "Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019)", https://doi.org/10.15454/EORHL8, Portail Data INRAE, V1 |
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Citation |
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Title: |
Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019) |
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Identification Number: |
doi:10.15454/EORHL8 |
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Authoring Entity: |
Loudet, Olivier (INRA - Institut National de la Recherche Agronomique) |
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Grant Number: |
ERC-2009-StG-243359 |
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Grant Number: |
ANR-09-BLAN-0366 |
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Distributor: |
Portail Data INRAE |
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Access Authority: |
Loudet, Olivier |
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Depositor: |
Loudet, Olivier |
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Date of Deposit: |
2018-06-24 |
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Study Scope |
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Keywords: |
Biodiversity and Ecology, Omics |
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Abstract: |
Each row represents a single HIF and the genotype of the F7 RIL it originates from is indicated along the chromosomes with RIL ID, markers and genotypic conventions from Publiclines http://publiclines.versailles.inra.fr/rils/index (i.e. 'A' = Col allele; 'B' = alternate parental allele; 'C' = heterozygous). The region highlighted in yellow is the segregating region that is tested in the HIF family through several fixed lines for each parental allele. For each of the 3 growth traits (Compactness29 = rosette compactness 29 days after sowing; PRA29 = Projected Rosette Area 29 days after sowing; RER16-29 = Relative rosette Expansion Rate between days 16 and 29 after sowing) in 2 conditions ('WW' = Well Watered / 'WD' = Water Deficit), whenever significant, the p-value of the comparison between allelic lines ('Pval') and the direction of the allelic effect ('sign' calculated as [Col-Xxx] where Xxx is the alternate parental allele) are indicated in the last columns of the table. |
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Kind of Data: |
Dataset |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Notes: |
<img src="https://www.etalab.gouv.fr/wp-content/uploads/2011/10/licence-ouverte-open-licence.gif" alt="Licence Ouverte" height="100"><a href="https://www.etalab.gouv.fr/licence-ouverte-open-licence">Licence Ouverte / Open Licence Version 2.0</a> compatible CC BY |
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Other Study Description Materials |
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Related Publications |
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Citation |
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Bibliographic Citation: |
Marchadier, Hanemian, Tisné et al., PLoS Genetics, 2019 https://doi.org/10.1371/journal.pgen.1007954 |
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Citation |
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Bibliographic Citation: |
Marchadier, Hanemian, Tisné et al., BioRxiv, 2018 |
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Label: |
Supp_DataSetS2F.xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |