Near infrared spectra of organic waste and plant samples acquired on different spectrometers (ICPSR doi:10.15454/Z9RW2M)

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Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Part 5: Other Study-Related Materials
Entire Codebook

Document Description

Citation

Title:

Near infrared spectra of organic waste and plant samples acquired on different spectrometers

Identification Number:

doi:10.15454/Z9RW2M

Distributor:

Portail Data INRAE

Date of Distribution:

2020-06-23

Version:

1

Bibliographic Citation:

Chauvergne, Celine; Latrille, Eric; Rossard, Virginie; Bonnal, Laurent; Bastianelli, Denis; Griveau, Yves; Mechin, Valerie; Carrere, Helene; Jacquemot, Marie-Pierre; Reymond, Matthieu, 2020, "Near infrared spectra of organic waste and plant samples acquired on different spectrometers", https://doi.org/10.15454/Z9RW2M, Portail Data INRAE, V1, UNF:6:k0XBZqf3HWhWp+VQklnBYA== [fileUNF]

Study Description

Citation

Title:

Near infrared spectra of organic waste and plant samples acquired on different spectrometers

Identification Number:

doi:10.15454/Z9RW2M

Authoring Entity:

Chauvergne, Celine (INRA - Institut National de la Recherche Agronomique)

Latrille, Eric (INRAE, LBE, ChemHouse Research Group, Montpellier, France)

Rossard, Virginie (INRAE, LBE, ChemHouse Research Group, Montpellier, France)

Bonnal, Laurent (CIRAD, SELMET, Montpellier, France)

Bastianelli, Denis (CIRAD, SELMET, Montpellier, France)

Griveau, Yves (INRAE, IJPB, Versailles, France)

Mechin, Valerie (INRAE, IJPB, Versailles, France)

Carrere, Helene (INRAE, LBE, Narbonne, France)

Jacquemot, Marie-Pierre (INRAE, IJPB, Versailles, France)

Reymond, Matthieu (INRAE, IJPB, Versailles, France)

Distributor:

Portail Data INRAE

Access Authority:

Latrille, Eric

Access Authority:

Rossard, Virginie

Depositor:

INRAE - Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement

Date of Deposit:

2020-06-16

Study Scope

Keywords:

Chemistry and chemical engineering, Food and food processing, Plant Breeding and Plant Products

Abstract:

A set of 127 organic samples was selected to cover a large range of variation. Spectra were acquired on three different spectrometers in three labs: NIRFlex N-500 FT-NIR (BUCHI, France, serial number 1000001305) at LBE in Narbonne, NIR-System5000 (FOSS, Denmark, serial number 94630632) at SELMET in Montpellier and ANTARIS II FT-NIR (ThermoFisher Scientific, USA, serial number AHY0800337) at IJPB in Versailles.

Kind of Data:

Dataset

Methodology and Processing

Sources Statement

Data Access

Notes:

<img src="https://www.etalab.gouv.fr/wp-content/uploads/2011/10/licence-ouverte-open-licence.gif" alt="Licence Ouverte" height="100"><a href="https://www.etalab.gouv.fr/licence-ouverte-open-licence">Licence Ouverte / Open Licence Version 2.0</a> compatible CC BY

Other Study Description Materials

File Description--f99825

File: List_of_organic_sample_names_and_spectra_codes.tab

  • Number of cases: 127

  • No. of variables per record: 8

  • Type of File: text/tab-separated-values

Notes:

UNF:6:k0XBZqf3HWhWp+VQklnBYA==

Variable Description

List of Variables:

Variables

LBEsamplecode

f99825 Location:

Variable Format: character

Notes: UNF:6:M/ZAwUPXg0yJvrRijWTeYw==

SELMETsamplecode

f99825 Location:

Variable Format: character

Notes: UNF:6:KQJSWOo6D9ZxKs4bD3EGKA==

IJPBsamplcode

f99825 Location:

Variable Format: character

Notes: UNF:6:1yBKd1HYZuACXG7BEC2huQ==

Spectracode

f99825 Location:

Variable Format: character

Notes: UNF:6:1o1sHpDDnfUwD4VlSOPYQA==

Samplenature

f99825 Location:

Variable Format: character

Notes: UNF:6:NFyBXaeP0BQ+mllfsInh4g==

BUCHINIRFlexN-500spectrum

f99825 Location:

Variable Format: character

Notes: UNF:6:r07aePOniEfcnCYq1lWysQ==

FOSSNIR-System5000spectrum

f99825 Location:

Variable Format: character

Notes: UNF:6:ye58deA004tQLFLvKSLhEQ==

ThermoScientificANTARISIIspectrum

f99825 Location:

Variable Format: character

Notes: UNF:6:ebB3uGnF6EyfcXQRC9uxqQ==

Other Study-Related Materials

Label:

Buchi-NIRFlexN500_cm-1_reflectance_spectra.tabular

Text:

BUCHI N500 spectrometer gave reflectance spectra in wave numbers, with a range of 4000 to 10000 cm-1 and a resolution of 4 cm-1. Each spectrum was an average of 96 spectral readings of the same cup or vial. Samples were poured either into 10 cm diameter cups (about 30g) or into 1.3 cm diameter vials (about 3g) and spectra were acquired in triplicate and then averaged.

Notes:

application/octet-stream

Other Study-Related Materials

Label:

FOSS-NIRSystem5000_nm_absorbance_spectra.tabular

Text:

FOSS spectrometer NIRSystem5000 gave absorbance spectra in wavelength with a range of 1100 to 2498 nm and a resolution of 2 nm. Each spectrum was an average of 32 spectral readings of the same cup. Samples were poured into 3.5 cm diameter cups (about 4g) and spectra were acquired in duplicate and automatically averaged.

Notes:

application/octet-stream

Other Study-Related Materials

Label:

README.pdf

Notes:

application/pdf

Other Study-Related Materials

Label:

ThermoScientific-ANTARIS-II_cm-1_absorbance_spectra.tabular

Text:

ThermoScientific ANTARIS II spectrometer gave absorbance spectra in wave numbers with a range of 4000 to 10001 cm-1 and a resolution of 3.86 cm-1. Samples were divided into 10 subsamples (aliquots) and poured into 0.8 cm diameter vials (about 2ml) which was scanned once. For each subsample, an average (spectrum) of 64 spectra were recorded.

Notes:

application/octet-stream