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Medicago truncatula SNP temporal data from: "Power and limits of selection genome scans on temporal data from a selfing population"
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Gay, Laurene, 2020, "Medicago truncatula SNP temporal data from: "Power and limits of selection genome scans on temporal data from a selfing population"", https://doi.org/10.15454/TYQDGP, Portail Data INRAE, V1, UNF:6:nt7te5W6j1eifPoBiuCDgQ== [fileUNF]
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Description
SNP data from a population located in Cape Corsica (42°58.406’ North, 9°22,015’ East, 362 m.a.s.l.), collected in 1987 (64 plants) and 2009 (96 plants).Genotyping was performed using two SNP chips specifically developed for M. truncatula (Loridon et al. 2013 Molecular Ecology Resources). Out of the 1920 SNPs, 137 were located in genes encoding flowering time, 721 in other candidate genes, in particular genes involved in symbiosis and 1062 at random positions of the genome.
Subject Plant Breeding and Plant Products; Biodiversity and Ecology
Related Publication Power and limits of selection genome scans on temporal data from a selfing population Miguel Navascués, Arnaud Becheler, Laurène Gay, Joëlle Ronfort, Karine Loridon, Renaud Vitalis. bioRxiv 2020.05.06.080895; doi: https://doi.org/10.1101/2020.05.06.080895 Loridon, K., C. Burgarella, N. Chantret, F. Martins, J. Gouzy, et al., 2013 Single-nucleotide polymorphism discovery and diversity in the model legume Medicago truncatula. Molecular Ecology Resources 13: 84–95. doi: 10.1111/1755-0998.12021.
1 File
SNP_Medicago_truncatula .tab
Tabular Data - 372.5 KB - May 12, 2020 - 8 Downloads
7 Variables, 1920 Observations - UNF:6:nt7te5W6j1eifPoBiuCDgQ==
1920 SNP
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