Oak Genome Sequencing Website

Version 2.0

Ehrenmann, Francois; Plomion, Christophe, 2020, "Oak Genome Sequencing Website", https://doi.org/10.15454/WSMRIN, Portail Data INRAE, V2

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Description	The oak genome sequencing website, concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees, is a permanent resource by INRAE, available at http://www.oakgenome.fr/. It provides access to various resources : oak genome by the numbers, data, links, publications, partners, funding and outreach. It was conducted by a French consortium led by Christophe Plomion at INRAE Bordeaux. The oak haploid genome assembly and corresponding annotation have been deposited in the European Nucleotide Archive under project accession code PRJEB19898. (2020-04-09)
Subject	Forests and Forest Products; Omics; Plant Health and Pathology; Biodiversity and Ecology; Genetic Resource
Keyword	Oak, genes, adaptation, sequencing, genomics, Plant evolution, Forestry
Related Publication	Plomion, C., Aury, J., Amselem, J. et al. Oak genome reveals facets of long lifespan. Nature Plants 4, 440–452 (2018). https://doi.org/10.1038/s41477-018-0172-3 doi: 10.1038/s41477-018-0172-3
Link to data	http://www.oakgenome.fr


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Citation Metadata

Dataset Persistent ID	doi:10.15454/WSMRIN
Publication Date	2020-04-10
Title	Oak Genome Sequencing Website
Link to data	http://www.oakgenome.fr
Author	Ehrenmann, Francois (INRA - Institut National de la Recherche Agronomique) - ORCID: 0000-0003-2727-0070 Plomion, Christophe (INRA - Institut National de la Recherche Agronomique) - ORCID: 0000-0002-3176-2767
Contact	Use email button above to contact. Ehrenmann, Francois (INRA - Institut National de la Recherche Agronomique) Plomion, Christophe (INRA - Institut National de la Recherche Agronomique)
Description	The oak genome sequencing website, concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees, is a permanent resource by INRAE, available at http://www.oakgenome.fr/. It provides access to various resources : oak genome by the numbers, data, links, publications, partners, funding and outreach. It was conducted by a French consortium led by Christophe Plomion at INRAE Bordeaux. The oak haploid genome assembly and corresponding annotation have been deposited in the European Nucleotide Archive under project accession code PRJEB19898. (2020-04-09)
Kind of Data	Dataset; Image; Interactive Resource; Service; Software
Data Origin	Other
Subject	Forests and Forest Products; Omics; Plant Health and Pathology; Biodiversity and Ecology; Genetic Resource
Keyword	Oak genes adaptation sequencing genomics Plant evolution Forestry
Related Publication	Plomion, C., Aury, J., Amselem, J. et al. Oak genome reveals facets of long lifespan. Nature Plants 4, 440–452 (2018). https://doi.org/10.1038/s41477-018-0172-3 doi: 10.1038/s41477-018-0172-3 https://doi.org/10.1038/s41477-018-0172-3
Grant Information	ANR: ANR-11-BSV6-0009 INRA CEA
Project Information	GENOAK (Sequencing of the oak genome and identification of genes that matter for forest tree adaptation)
Depositor	Ehrenmann, Francois
Deposit Date	2020-04-10
Time Period Covered	Start: 2011-09-01 ; End: 2015-09-01
Date of Collection	Start: 2011-09-01

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