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Metabolome of tomato fruit pericarp of gbp1-c CRISPR mutant (INRA - Institut National de la Recherche Agronomique)
Metabolomic analyses of the tomato pericarp of gbp1-c CRISPR mutants during fruit growth. The mutants have disruption of the SlGBP1 gene encoding a guanylate-binding protein. Metabolomic analyses of the tomato fruit pericarp were performed on semi-polar extracts using proton-NMR and LC-MS.
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text/plain - 48.8 KB - MD5: a7f7c5d7b7a43e942e1abd13c19869af
CodeDonnées
Bucket file to be used with NMRProcFlow tool
text/plain - 1.6 KB - MD5: 09c3b4826a8fabd875cbb07caaf18dc3
Données
File with the name of the samples and factors (fruit growth stages; WT, mutant lines), to be used with NMRProcFlow tool
application/zip - 112.3 MB - MD5: fc93128c7bdf778206a38e54c46d16df
Données
36 NMR spectra directories in Bruker format
application/vnd.ms-excel - 203.0 KB - MD5: a51a163df10ad85d4941f28ea23abacd
Données
Table of the relative quantification by 1D 1H-NMR of semipolar extract of gpb1-c mutants and wild type tomato fruit pericarp.
text/plain - 3.9 KB - MD5: c9e65898bcdf9b039c1ec410d1a8fa1f
Code
MacroCommand file to be used with NMRProcFlow tool for local baseline and realignement processing before bucketing of 1D NMR spectra
text/tab-separated-values - 3.6 KB - MD5: e1847990a40ff3c8b229dae29dfd02bc
Données
List of metabolites detected in the 1H-NMR spectra (500 MHz) of semi-polar extracts of tomato fruit pericarp.
Jul 2, 2020
Bernillon, Stéphane, 2020, "Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type", https://doi.org/10.15454/YVKQRW, Portail Data INRAE, V1
Negative mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.
text/csv - 2.9 MB - MD5: de4b56a515befcdc6781fd1e7309e0e4
Data output from MSDIAL software with an additionnal dry-weight normalization
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 27.5 KB - MD5: 66c20ffd44b7eb0de8f6647e5ed72450
List of annotated variables
application/x-7z-compressed - 251.1 MB - MD5: 25a9f5a5ed866ba4e42df9a6240ca5ac
48 negative mode LC-MS acquisitions of samples, QC and blank extractions
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