Metabolome of tomato fruit pericarp of gbp1-c CRISPR mutant

Metabolomic analyses of the tomato pericarp of gbp1-c CRISPR mutants during fruit growth. The mutants have disruption of the SlGBP1 gene encoding a guanylate-binding protein. Metabolomic analyses of the tomato fruit pericarp were performed on semi-polar extracts using proton-NMR and LC-MS.

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1 to 10 of 23 Results

Summary of NMR annotation of semi-polar extracts of tomato fruit pericarp.tab Jun 30, 2020 - 1D 1H-NMR metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type text/tab-separated-values - 3.6 KB - MD5: e1847990a40ff3c8b229dae29dfd02bc Données List of metabolites detected in the 1H-NMR spectra (500 MHz) of semi-polar extracts of tomato fruit pericarp.
Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type Jul 3, 2020 Bernillon, Stéphane, 2020, "Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type", https://doi.org/10.15454/IFPJAP, Portail Data INRAE, V1 Positive mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.
NP_macro_cmd_CDBBI_18P09_CM.txt Jun 30, 2020 - 1D 1H-NMR metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type text/plain - 3.9 KB - MD5: c9e65898bcdf9b039c1ec410d1a8fa1f Code MacroCommand file to be used with NMRProcFlow tool for local baseline and realignement processing before bucketing of 1D NMR spectra
NMR Rosetta stone - Sample name codes.pdf Jul 3, 2020 - 1D 1H-NMR metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type application/pdf - 508.9 KB - MD5: eaacedf2dad59631787fb451494fc304 DocumentationDonnées Correspondance table of sample names used in NMR dataset and in the publication Musseau et al. 2020
Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type Jul 2, 2020 Bernillon, Stéphane, 2020, "Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type", https://doi.org/10.15454/YVKQRW, Portail Data INRAE, V1 Negative mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.
MET-2018-P13-CM_SOP for LCMS metabolomics profiling of tomato fruit pericarp of gbp1-c mutants and Wild Type.txt Jul 3, 2020 - Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type text/plain - 1.3 KB - MD5: c707e483ff40f2bb931879867789bfa7
MET-2018-P13-CM_LCMSneg_MSDIAL_Parameters.txt Jul 2, 2020 - Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type text/plain - 2.2 KB - MD5: b6ee87e24103494f0d4f668024d4f625 used parameters with MSDial v3.66
MET-2018-P13-CM_LCMS_SOP for LCMS metabolomics profiling of tomato fruit pericarp of gbp1-c mutants and Wild Type.txt Jul 2, 2020 - Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type text/plain - 1.3 KB - MD5: c707e483ff40f2bb931879867789bfa7
MET-2018-P13-CM_LCMS_pos_MSDIAL_Parameters_4_2019371357.txt Jul 3, 2020 - Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type text/plain - 2.3 KB - MD5: c9791f9de1d0b62d728b652c3a4a74bc used parameters with MSDial v3.66
MET-2018-P13-CM_LCMS_pos_DWnorm_MSDIAL_output_4_2019371142.csv Jul 3, 2020 - Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type text/csv - 1.0 MB - MD5: 2065680dca555b32890b367a7796c7f5 Data output from MSDIAL software with an additional dry-weight normalization

Summary of NMR annotation of semi-polar extracts of tomato fruit pericarp.tab

Jun 30, 2020 - 1D 1H-NMR metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

text/tab-separated-values - 3.6 KB - MD5: e1847990a40ff3c8b229dae29dfd02bc

Données

List of metabolites detected in the 1H-NMR spectra (500 MHz) of semi-polar extracts of tomato fruit pericarp.

Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

Jul 3, 2020

Bernillon, Stéphane, 2020, "Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type", https://doi.org/10.15454/IFPJAP, Portail Data INRAE, V1

Positive mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.

NP_macro_cmd_CDBBI_18P09_CM.txt

Jun 30, 2020 - 1D 1H-NMR metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

text/plain - 3.9 KB - MD5: c9e65898bcdf9b039c1ec410d1a8fa1f

Code

MacroCommand file to be used with NMRProcFlow tool for local baseline and realignement processing before bucketing of 1D NMR spectra

NMR Rosetta stone - Sample name codes.pdf

Jul 3, 2020 - 1D 1H-NMR metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

application/pdf - 508.9 KB - MD5: eaacedf2dad59631787fb451494fc304

DocumentationDonnées

Correspondance table of sample names used in NMR dataset and in the publication Musseau et al. 2020

Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

Jul 2, 2020

Bernillon, Stéphane, 2020, "Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type", https://doi.org/10.15454/YVKQRW, Portail Data INRAE, V1

Negative mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.

MET-2018-P13-CM_SOP for LCMS metabolomics profiling of tomato fruit pericarp of gbp1-c mutants and Wild Type.txt

Jul 3, 2020 - Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

text/plain - 1.3 KB - MD5: c707e483ff40f2bb931879867789bfa7

MET-2018-P13-CM_LCMSneg_MSDIAL_Parameters.txt

Jul 2, 2020 - Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

text/plain - 2.2 KB - MD5: b6ee87e24103494f0d4f668024d4f625

used parameters with MSDial v3.66

MET-2018-P13-CM_LCMS_SOP for LCMS metabolomics profiling of tomato fruit pericarp of gbp1-c mutants and Wild Type.txt

Jul 2, 2020 - Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

text/plain - 1.3 KB - MD5: c707e483ff40f2bb931879867789bfa7

MET-2018-P13-CM_LCMS_pos_MSDIAL_Parameters_4_2019371357.txt

Jul 3, 2020 - Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

text/plain - 2.3 KB - MD5: c9791f9de1d0b62d728b652c3a4a74bc

used parameters with MSDial v3.66

MET-2018-P13-CM_LCMS_pos_DWnorm_MSDIAL_output_4_2019371142.csv

Jul 3, 2020 - Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

text/csv - 1.0 MB - MD5: 2065680dca555b32890b367a7796c7f5

Data output from MSDIAL software with an additional dry-weight normalization

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