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1 to 10 of 13 Results
Oct 14, 2020
Danjon, Frédéric; Saint Cast, Clément; Meredieu, Céline; Bert, Didier; Danquechin Dorval, Antoine; Issenhuth, Bernard; Lagane, Frédéric; Ségura, Raphaël, 2020, "Descriptive variables of 11,004 roots from 69 Pinus pinaster root systems excavated and digitized in 3D", https://doi.org/10.15454/K9DQPA, Portail Data INRAE, V1, UNF:6:FL0LCMy3RvT1EXOu6emvZg== [fileUNF]
This data set include 11004 roots from 69 coarse root systems of Pinus pinaster trees. These trees belong from the same local provenance of P. pinaster trees germinated in the field and grown in the same area (forest range of the “Landes de Gascogne” in Southwest France).These tr...
Sep 21, 2020
Bert, Didier; Le Provost, Grégoire; Delzon, Sylvain; Plomion, Christophe; Gion, Jean-Marc, 2020, "Needle and stem histogical data for Pinus pinaster plasticity study", https://doi.org/10.15454/N8GLMY, Portail Data INRAE, V1
This dataset contains the data that correspond to the article "Needle anatomic plasticity is related to better water-use efficiency and resistance to embolism in fast-growing Pinus pinaster families in conditions of water scarcity". The dataset is composed of two files: Variables...
Aug 5, 2020 - Portail Data INRAE
Ehrenmann, Francois; Plomion, Christophe, 2020, "Oak Genome Sequencing Website", https://doi.org/10.15454/WSMRIN, Portail Data INRAE, V2
The oak genome sequencing website, concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees, is a permanent resource by INRAE, available at http://www.oakgenome.fr/. It provides access to various resources : oak genome b...
Jun 19, 2020
Bert, Didier; Hampe, Arndt, 2020, "Dendrochronology of 661 Quercus robur for SPONFOREST Project", https://doi.org/10.15454/A2JJFG, Portail Data INRAE, V1
15 spontaneous stands of pedunculate oak were sampled in the Landes region close to Bordeaux. In each stand, all the oaks were cored with an increment borer. The 661 cores were measured to get series of annual growth. The ring-width data were cross dated and standardized with RCS...
Apr 8, 2020
Bert, Didier; Lebourgeois, François; Ponton, Stéphane; Musch, Brigitte; Ducousso, Alexis, 2020, "Growth data for 26 provenances of Quercus petraea and Q robur at three common gardens in France", https://doi.org/10.15454/PADEA1, Portail Data INRAE, V1, UNF:6:Ep3GgBi9KkZP2og4DL2brA== [fileUNF]
The dataset is composed of 5 columns and 1140 lines: “Garden” is the code for the common garden: 1 is for “Petite Charnie” (western France), 2 for “Vincence” (center of France) and 3 for “Sillegny” (north-eastern France) “Code” is the code number of the oak provenance “Provenance...
Mar 24, 2020
Dutech, Cyril; Feau, Nicolas; Lesur, Isabelle; Ehrenmann, François; Letellier, Thomas; Li, Bayo; Mouden, Charlotte; Guichoux, Erwan; Desprez-Loustau, Marie-Laure; Gross, Andrin, 2020, "An easy and robust method for isolation and validation of single nucleotide polymorphic markers from the Erysiphe alphitoides, the oak powdery mildew, draft genome", https://doi.org/10.15454/UGMTBK, Portail Data INRAE, V2
This dataset includes the sequence and SNP data, and the scripts for detecting SNP from targeted sequences isolated from the Erysipe alphitoides draft genome. The draft genome sequencing used the SRR10956459 short reads (Bioproject: PRJNA593204). Assembly and Annotation of the dr...
Feb 10, 2020
Ehrenmann, Francois; Kremer, Antoine; Truffaut, Laura, 2020, "TREEPEACE project website", https://doi.org/10.15454/LU5QHT, Portail Data INRAE, V1
TREEPEACE project website There are widespread concerns that trees, due to their long life-span, are not able to cope with the rapid ongoing climate change. While many studies have so far investigated potential impacts of climate change on forests, much less attention has been gi...
Sep 26, 2019 - Portail Data INRAE
Bonal, Raúl; Guichoux, Erwan; Delcamp, Adline; Laizet, Yec'han; Hampe, Arndt, 2019, "70 highly validated SNP markers for Quercus ilex", https://doi.org/10.15454/AOVOO2, Portail Data INRAE, V1
70 highly validated SNP markers for Quercus ilex developped from ddRAD-Seq data following Garcia et al., 2018. PCR primer sequences and single base extension primers for MassArray analysis are provided.
Jun 28, 2019 - Portail Data INRAE
Fort, Tania; Pauvert, Charlie; Zanne, Amy E.; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2019, "Bioinformatic and statistical scripts to analyze acorn mycobiota structure and composition", https://doi.org/10.15454/SM6OCR, Portail Data INRAE, V1, UNF:6:TFUhrxuDLdy+rmsmGam2Yg== [fileUNF]
This dataset contains R-scripts to perform bioinformatic and statistical analysis on acorn associated fungal communities (Fort et al., Maternal effects and environmental filtering shape seed fungal communities in oak trees. Submitted). Bioinformatic script was applied to raw sequ...
Mar 22, 2019 - Vocabulaires Ouverts
Michotey, Célia; Chaves, Ines; Anger, Christel; Jorge, Véronique; Ehrenmann, Francois; Jean, Frederic; Opgenoorth, Lars, 2019, "Woody Plant Ontology", https://doi.org/10.15454/JB2WCE, Portail Data INRAE, V1
The Woody Plant Ontology lists reference variables used for experimentations and observations on woody plants (forest trees and shrubs, and possibly fruit trees). It is an international initiative based on various communities (French, Portuguese and European). Terms are collected...
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