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1 to 10 of 81,386 Results
Sep 27, 2021 - Biogeco Dataverse
Penaud, Benjamin; Dutech, Cyril; Laurent, Benoît, 2021, "SNP4OrphanSpecies: A bio-informatic pipeline to isolate robust molecular markers for phylogeny, phylogeographical and population genetic studies in non-model species.", https://doi.org/10.15454/GWKRKY, Portail Data INRAE, V1
This pipeline performs a de-novo genome assembly, identifies single copy genes in the genome, and designs several pools of pair of primers for amplifying regions of these genes in multiplex. The pipeline is implemented in a SnakeMake workflow and uses Illumina data for the de-nov...
Sep 27, 2021
Mompart, Florence; Kamgoué, Alain; Lahbib-Mansais, Yvette; Robelin, David; Yerle-Bouissou, Martine, 2021, "Data linked to the published manuscript : The 3D nuclear conformation of the major histocompatibility complex changes upon cell activation both in porcine and human macrophages", https://doi.org/10.15454/IEWMSH, Portail Data INRAE, V1, UNF:6:vCBCrtOFIMGWDYCyJjjKCQ== [fileUNF]
Various data files for: (i) the analysis of 3D nuclear organization of three regions (class I, II and III) of the major histocompatibility complex (MHC) in porcine and in human macrophages, (ii) the analysis of the expression level of genes targeting each of the three MHC class b...
Sep 23, 2021 - Infosol Dataverse
Chalaux, Thomas; Lacoste, Marine; Saby, Nicolas,, 2021, "Slakestable : R package to explore raw data from the Slakes app", https://doi.org/10.15454/BGSMUE, Portail Data INRAE, V1
Le package "slakestable" permet de formater rapidement les données brutes issues de l'application pour smartphone "Slakes" (Fajardo et al., 2016). La fonction "tablecourbe" permet de créer une unique table contenant les coefficients a, b, c issues de l'ajustement sur la Gompertz...
Sep 22, 2021 - Dynafor dataverse
Esquerre, Diane; Vialatte, Aude; Molina, Jérôme; Willm, Jérôme, 2021, "Données annuelles de 2014 à 2019,issues des enquêtes sur les pratiques agricoles (phytosanitaires,fertilisation et travail du sol) dans les parcelles du réseau SEBIOPAG,site d'étude des Vallées et Coteaux de Gascogne", https://doi.org/10.15454/JDSAT1, Portail Data INRAE, V2
Données d'enquêtes sur les pratiques agricoles effectuées,obtenues annuellement auprès des agriculteurs du réseau. Saisies sous la base nationale Agrosyst
Sep 21, 2021 - PREMIUM Dataverse
Pénicaud, Caroline; Quentier, Camille; Gerbino, Esteban, 2021, "Life Cycle Assessment of fructo- and galacto-oligosaccharides (FOS and GOS) produced by synthesis or hydrolysis", https://doi.org/10.15454/BRBK8X, Portail Data INRAE, V1, UNF:6:4anQMP8akJ02u2Ta17c0Xw== [fileUNF]
This dataset presents Life Cycle Assessment (LCA) of the production of FOS and GOS by enzymatic synthesis from glucose (to get FOS) or lactose (to get GOS) and hydrolytic production from extraction of yacon potato (to get FOS) or chickpea (to get GOS). A cradle-to-gate approach w...
Sep 17, 2021
Nitschelm, Laure; Flipo, Blanche; Auberger, Julie; Chambaut, Hélène; Dauguet, Sylvie; Espagnol, Sandrine; Gac, Armelle; Le Gall, Cécile; Malnoé, Caroline; Perrin, Aurélie; Ponchant, Paul; Renaud-Gentié, Christel; Tailleur, Aurélie; van der Werf, Hayo M.G., 2020, "Life cycle assessment data of French agricultural organic products", https://doi.org/10.15454/TTR25S, Portail Data INRAE, V3
This data were created during the research project ACV Bio, funded by the French agency for ecological transition (ADEME), and the French ministry for ecological transition. Its main objective was the production of Life Cycle Inventory (LCI) and Life Cycle Assessement (LCA) data...
Sep 16, 2021 - Dynafor dataverse
Vialatte, Aude; Molina, Jérôme, 2021, "Données annuelles d'évaluation des taux de prédation de ravageurs au moyen de cartes de proies,dans les parcelles de grandes cultures du réseau SEBIOPAG de 2014 à 2019", https://doi.org/10.15454/G3ERWZ, Portail Data INRAE, V1
Données issues du site d'étude des Vallées et Coteaux de Gascogne,portant sur des taux de prédation de 3 proies sentinelles-types collées sur des cartons pour évaluer l'influence relative des facteurs locaux (pratiques à la parcelle) et paysagers (structure dans un buffer de 1km²...
Sep 15, 2021 - Biogeco Dataverse
Le Provost, Grégoire, 2021, "Locally adapted oak populations along an elevation gradient display different molecular strategies to regulate bud phenology.", https://doi.org/10.15454/XMEKFX, Portail Data INRAE, V1, UNF:6:D5LA+O5Ud+gOe0ZsyRKOaw== [fileUNF]
These files includes normalized values for RNAseq data, Fold change Ratio, Gene set enrichment analysis and subnetwork enrichment analysis for genes displaying a significant dormancy, elevation and dormancy-by-elevation interaction effect analysed in the paper entilted: "Locally...
Sep 15, 2021 - Biogeco Dataverse
Le Provost, Grégoire, 2021, "Water stress-associated isolation barriers between two sympatric oak species", https://doi.org/10.15454/SONFVF, Portail Data INRAE, V1, UNF:6:dKroXMykQZ20wLh5ptYgbA== [fileUNF]
These files includes normalized values for RNAseq data, Fold change Ratio and Gene set enrichment analysis. Supplementary file 8 include Fst value for the differentially expressed genes and their associated effect analysed in the paper entitled "Water stress-associated isolation...
Sep 15, 2021 - Portail Data INRAE
Le Provost Grégoire, 2021, "Molecular plasticity to soil water deficit differs between sessile oak (Quercus Petraea (Matt.) Liebl.) high- and low-water use efficiency genotypes", https://doi.org/10.15454/J1VQDO, Portail Data INRAE, V1, UNF:6:+QcyKVOXntL9EQan1uWCmQ== [fileUNF]
These files includes normalized values for RNAseq data, Fold change Ratio and Gene set enrichment analysis as well as ecophysiological measurement and correlation analysis described in the publication entiled "Molecular plasticity to soil water deficit differs between sessile oak...
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