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1 to 10 of 30 Results
Apr 13, 2018 - Biogeco Dataverse
Lesur Kupin, Isabelle, 2018, "TREEPEACE: Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand", https://doi.org/10.15454/OMO2JC, Portail Data INRAE, V1
Le jeu de données est constitué de 191,281 SNPs identifiés dans 297 arbres (mélange de Q. robur et Q. petraea) situés dans la forêt de La Petite Charnie. Ces SNPs ont été détectés sur le génome de référence du chêne 3P, obtenu dans le cadre du projet ANR Genoak et hébergé par l'U...
Jul 19, 2018 - Portail Data INRAE
Chaumeil, Philippe; Fischer-Le Saux, Marion; Frigerio, Jean-Marc; Grenier, Eric; Rimet, Frédéric; Streito, Jean-Claude; Laval, Valérie; Franc, Alain, 2018, "R-Syst: a network providing curated molecular databases and data analysis tools for taxonomy and systematics (Prokaryotes and Eucaryotes)", https://doi.org/10.15454/OEDAUS, Portail Data INRAE, V1
R-Syst network deals about systematic and (meta) barcoding and provide curated molecular databases for species identification and provide tools for diagnosis and inventories. The stakes are at the same time a precise diagnosis of organisms of interest (for example pathogens detec...
Oct 1, 2018 - Biogeco Dataverse
Caignard, Thomas; Kremer, Antoine, 2018, "TREEPEACE: Heritability and genetic architecture of reproduction-related traits in a temperate oak species", https://doi.org/10.15454/PGKKTK, Portail Data INRAE, V1, UNF:6:jSMwkS9b86gQdDfMCdgKsA== [fileUNF]
The dataset contains data characterizing the reproduction of 342 trees monitored during four years, from 2014 to 2017, within a full-sib family of pedunculated oak (Quercus robur) situated at the experimental unit of Bourran, France. Trees were planted within a randomized incompl...
Oct 16, 2018 - BioForA Dataverse
Rogier, Odile; Chateigner, Aurélien; Amanzougarene, Souhila; Lesage-Descauses, Marie-Claude; Balzergue, Sandrine; Brunaud, Véronique; Caius, José; Soubigou-Taconnat, Ludivine; Jorge, Véronique; Segura, Vincent, 2018, "Data from: Accuracy of RNAseq based SNP discovery and genotyping in Populus nigra", https://doi.org/10.15454/KZOPZB, Portail Data INRAE, V1
This dataset includes analysis files for the paper "Accuracy of RNAseq based SNP discovery and genotyping in Populus nigra"
Dec 12, 2018
Sanchez Rodriguez, Leopoldo, 2018, "simulator METAGENE Fortran code", https://doi.org/10.15454/ELCSZI, Portail Data INRAE, V1
Fortran code of simulator used to generate norms of reaction
Mar 22, 2019 - Vocabulaires Ouverts
Michotey, Célia; Chaves, Ines; Anger, Christel; Jorge, Véronique; Ehrenmann, Francois; Jean, Frederic; Opgenoorth, Lars, 2019, "Woody Plant Ontology", https://doi.org/10.15454/JB2WCE, Portail Data INRAE, V1
The Woody Plant Ontology lists reference variables used for experimentations and observations on woody plants (forest trees and shrubs, and possibly fruit trees). It is an international initiative based on various communities (French, Portuguese and European). Terms are collected...
Mar 28, 2019 - UEFP Dataverse
Cheval, Nicolas; Bernier, Frédéric, 2019, "Echelle de notation du débourrement d'espèces forestières", https://doi.org/10.15454/HLQKDJ, Portail Data INRAE, V1, UNF:6:ZJUdWtTdeq718+xcp/XqmQ== [fileUNF]
Cet outil excel associe une échelle de notation phénologique du débourrement des résineux (11 pins + 7 autres résineux) et 14 feuillus. Il s'inspire de l'échelle de notation BBCH et contient une description de chaque stade associé à une photo.
May 13, 2019
Ningre, Francois, 2019, "Dynamics of main stand characteristics (N, Cg) of an oak and a beech spacing and thinning trials at an early development stage, in view to modeling oak and beech “size-density” trajectories.", https://doi.org/10.15454/LBPYLN, Portail Data INRAE, V1, UNF:6:MyA/ZHcQlBsyzKgdTZJZSQ== [fileUNF]
The two datasets (oak.tab and beech.tab) were obtained from an experimental plantation established in the spring of 1981 in the Lyons-la-Forêt National Forest in northwestern France (49°28’19”N, 1°33’52”E) and followed until 2017. These datasets obtained from regular inventories...
Jun 13, 2019
Le Goff, Noël, 2019, "Above and belowground biomass data for a set of beech trees of different age and crown classes sampled in Hesse state forest (NE France) with a view to analyzing the distribution and the allocation of biomass in the tree", https://doi.org/10.15454/8CLEGO, Portail Data INRAE, V1, UNF:6:HDb+DRUgMjU4MmuN/sKVVA== [fileUNF]
A first set (samples 1 and 2 in the data tables) comprising 23 beech (Fagus sylvatica L.) trees of different crown classes (dominant, co-dominant, intermediate, suppressed), aged 30 in average, was selected and felled in 1996-1997 in a compartment of the state forest of Hesse (NE...
Jun 28, 2019 - Portail Data INRAE
Fort, Tania; Pauvert, Charlie; Zanne, Amy E.; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2019, "Bioinformatic and statistical scripts to analyze acorn mycobiota structure and composition", https://doi.org/10.15454/SM6OCR, Portail Data INRAE, V1, UNF:6:TFUhrxuDLdy+rmsmGam2Yg== [fileUNF]
This dataset contains R-scripts to perform bioinformatic and statistical analysis on acorn associated fungal communities (Fort et al., Maternal effects and environmental filtering shape seed fungal communities in oak trees. Submitted). Bioinformatic script was applied to raw sequ...
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