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1 to 10 of 20 Results
May 18, 2021 - Portail Data INRAE
Chonova, Teofana; Keck, Francois; Bouchez, Agnès; Rimet, Frederic, 2020, "A ready-to-use database for DADA2: Diat.barcode_rbcL_263bp_DADA2 based on Diat.barcode v9", https://doi.org/10.15454/QBLSXP, Portail Data INRAE, V3
This database is an adaptation for DADA2 of Diat.barcode v9. Length of sequences is 263 bp ------------------------- Rimet, Frederic; Chonova, Teofana; Gassiole, Gilles; Gusev, Evgenuy; Kahlert, Maria; Keck, François; Kelly, Martyn; Kulikovskiy, Maxim; Maltsev, Yevhen; Mann, Davi...
Jan 19, 2021 - Portail Data INRAE
Gay, Laurene, 2020, "Medicago truncatula flowering time data from: Evolution of flowering time in a selfing annual plant - Roles of adaptation and genetic drift", https://doi.org/10.15454/ZY83BE, Portail Data INRAE, V3, UNF:6:lq8IWDHWtTyKiDh07aSTRg== [fileUNF]
Phenotypic and genetic dataset for a population of Medicago truncatula located in Cape Corsica (CO3), analysed in "Evolution of flowering time in a selfing annual plant: Roles of adaptation and genetic drift". The readme file summarizes the different datasets available.
Jan 15, 2021 - Fruit tree phenology
Lanoue, David; Delépine, Anthony; Orain, Gilles; Lemarquand, Arnaud; Didelot, Frédérique, 2020, "Phenological data of 26 varieties of apple, apricot, cherry trees and peach trees in a French orchard of Loire Valley since 2016", https://doi.org/10.15454/SCTMIU, Portail Data INRAE, V3, UNF:6:4T2gNqOfSaaiDZo2PP5yWQ== [fileUNF]
These datasets contain phenological observations on 7 apple, apricot, cherry varieties or mutants and 5 peach varieties evaluated since 2016. These data come from observations carried out since 2016 on the "La Rétuzière" estate belonging to the Horticulture Experimental Facility...
Jan 15, 2021 - Portail Data INRAE
Castagneyrol, Bastien; van Halder, Inge; Kadiri, Yasmine; Schillé, Laura; Jactel, Hervé, 2020, "Raw data for the paper "Host-mediated, cross-generational intraspecific competition in a herbivore species"", https://doi.org/10.15454/KMUX39, Portail Data INRAE, V3, UNF:6:t1nSuO9c2LkYU+KuXXPn/Q== [fileUNF]
The file contains raw data used in the paper "Host-mediated, cross-generational intraspecific competition in a herbivore species". `x` and `y` are the position of each box tree in the green house; `Treatment` is the prior herbivory treatment; `Clutch.number` is the total number o...
Jan 14, 2021 - Fruit tree phenology
Lanoue, David; Delépine, Anthony; Orain, Gilles; Lemarquand, Arnaud; Didelot, Frédérique; Maquaire, Jocelyn; Hameline, Sylviane, 2020, "Phenological data of 28 apple tree varieties and 4 pear tree varieties in a French orchard of Loire Valley since 2004", https://doi.org/10.15454/D4MJMJ, Portail Data INRAE, V2, UNF:6:QaG+2eDPTC0X1CRfoQSfCw== [fileUNF]
These datasets contain phenological observations on 28 apple varieties or mutants and 4 pear varieties evaluated since 2004. These data come from observations carried out since 2004 on the two sites of the Horticulture Experimental Facility based in the Loire Valley in France. Th...
Dec 30, 2020 - Portail Data INRAE
Julier, Bernadette, 2020, "Genetic diversity for seed germination in response to temperature and scarification / Diversité génétique pour la germination des graines de luzerne en réponse à la température et à la scarification", https://doi.org/10.15454/YIECZS, Portail Data INRAE, V1, UNF:6:SaRyQd8LfUD4f7gDPMnhiw== [fileUNF]
Lucerne (Medicago sativa), a major perennial pasture legume, belongs to a species complex that includes several subspecies with wild and cultivated populations. Stand establishment may be compromised by poor germination. Seed scarification and deterioration as well as temperature...
Dec 8, 2020 - ThaliaDB maize Dataverse
Nicolas, Stéphane; Madur, Delphine; Charcosset, Alain; Bauland, Cyril; Combes, Valérie; Berard, Aurélie; Arca, Mariangela; Mary-Huard, Tristan; Le Paslier, Marie-Christine; Gouesnard, Brigitte, 2020, "Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array", https://doi.org/10.15454/GANJ7J, Portail Data INRAE, V1, UNF:6:IvZiMGs4Oo8oWZqgBbcDdA== [fileUNF]
R scripts and fluorescence intensity datasets of 24 controlled pools and 327 inbred lines panels extracted from 50K Illumina Infinium HD array (Ganal et al., 2010). These datasets and R scripts can be used to calibrate a model to predict allelic frequencies in new DNA bulks using...
Dec 7, 2020 - Omics Dataverse
Fort, Tania; Pauvert, Charlie; Zanne, Amy; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2020, "Bioinformatic and statistical scripts for "Fort et al. 2020. Maternal effects shape seed fungal communities in Quercus petraea, New Phytologist"", https://doi.org/10.15454/0CNFWS, Portail Data INRAE, V3, UNF:6:+ROFl+GYxv+1vFHcrzj8MA== [fileUNF]
This dataset contains R-scripts to analyse the diversity and composition of seed fungal communities (Fort et al. 2020. Maternal effects shape seed fungal communities in Quercus petraea. New Phytologist, https://doi.org/10.1111/nph.17153). The bioinformatic script was applied to r...
Dec 1, 2020 - Portail Data INRAE
Chonova, Teofana; Vasselon, Valentin; Bouchez, Agnès; Rimet, Frédéric, 2020, "A ready-to-use database for mothur: Diat.barcode_rbcL_263bp_mothur based on Diat.barcode v9", https://doi.org/10.15454/SOMFSU, Portail Data INRAE, V2
Ready to use database adapted from Diat.barcode v9 for MOTHUR
Sep 21, 2020 - Biogeco Dataverse
Bert, Didier; Le Provost, Grégoire; Delzon, Sylvain; Plomion, Christophe; Gion, Jean-Marc, 2020, "Needle and stem histogical data for Pinus pinaster plasticity study", https://doi.org/10.15454/N8GLMY, Portail Data INRAE, V1
This dataset contains the data that correspond to the article "Needle anatomic plasticity is related to better water-use efficiency and resistance to embolism in fast-growing Pinus pinaster families in conditions of water scarcity". The dataset is composed of two files: Variables...
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