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1 to 10 of 13 Results
Aug 20, 2018 - GnpIS Dataverse
François-Xavier Oury; Emmanuel Heumez; Bernard Rolland; Jérôme Auzanneau; Pierre Bérard; Maryse Brancourt-Hulmel; Xavier Charrier; Hubert Chiron; Camille Depatureaux; Laurent Falchetto; Olivier Gardet; Stéphane Gilles; Alex Giraud; Christophe Lecomte; Jean-Yves Morlais; Pierre Pluchard; Didier Tropée; Maxime Trottet; Patrice Walczak; Gérard Doussinault; Michel Rousset; Gilles Charmet, 2018, "Winter wheat (Triticum aestivum L) phenotypic data from the multiannual, multilocal field trials of the INRA Small Grain Cereals Network.", https://doi.org/10.15454/1.4489666216568333E12, Portail Data INRAE, V5
Abstract:Winter wheat phenotypic data from a French experimental network. It includes observations for different characters (agronomic, quality, disease, phenology,…) on more than 10 experimental locations during more than 15 years and for more than 1700 winter wheat genotypes.
Nov 15, 2019 - Vocabulaires Ouverts
Pommier, Cyril; Letellier, Thomas; Pietragalla, Julian; Laporte, Marie Angélique; Arnaud, Elizabeth; Le Gouis, Jacques; Shrestha Rosemary, 2019, "Wheat Crop Ontology", https://doi.org/10.15454/3EDMCP, Portail Data INRAE, V1
The Wheat Crop Ontology list reference variables used for field or greenhouse experimentations and observations on Triticeae (Triticum, Hordeum, Aegilops, …). It is an international initiative gathering American and European contributions. Terms are organized following the Crop O...
Apr 13, 2018 - Biogeco Dataverse
Lesur Kupin, Isabelle, 2018, "TREEPEACE: Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand", https://doi.org/10.15454/OMO2JC, Portail Data INRAE, V1
Le jeu de données est constitué de 191,281 SNPs identifiés dans 297 arbres (mélange de Q. robur et Q. petraea) situés dans la forêt de La Petite Charnie. Ces SNPs ont été détectés sur le génome de référence du chêne 3P, obtenu dans le cadre du projet ANR Genoak et hébergé par l'U...
May 17, 2021 - URGI Plant and Fungi Dataverse
Michotey, Celia; Vauthier, Denis; Fady, Bruno, 2021, "Phenotypic trait dataset of Pinus pinea measured in the common gardens of the Forest Genetics Network for Research and Experimentation (GEN4X)", https://doi.org/10.15454/MQKQ1O, Portail Data INRAE, V1
This dataset is composed of observations such as height, circumference, cone number, survival and forking, made until 2012 in 7 Pinus pinea provenance trials of the French common gardens network GEN4X (forest genetics network for research and experimentation). It makes possible t...
Sep 17, 2019 - EPGV
Toda, Nicholas, 2019, "NLGenomeSweeper", https://doi.org/10.15454/DS6VIK, Portail Data INRAE, V1
NLGenomeSweeper is a command line bash pipeline that searches a genome for NBS-LRR (NLR) disease resistance genes based on the presence of the NB-ARC domain using the consensus sequence of the Pfam HMM profile (PF00931) and class specific consensus sequences built from Vitis vini...
Dec 9, 2020 - Biogeco Dataverse
Alexandre, Hermine; Truffaut, Laura; Klein, Etienne; Ducousso, Alexis; Chancerel, Emilie; Lesur, Isabelle; Dencausse, Benjamin; Louvet, Jean-Marc; Nepveu, Gérard; Torres-Ruiz, José M.; Lagane, Frédéric; Musch, Brigitte; Delzon, Sylvain; Kremer, Antoine, 2020, "Long term monitoring of evolutionary changes in oak stands", https://doi.org/10.15454/XL23BS, Portail Data INRAE, V1, UNF:6:9upGid54ouhcG7oBqApC8Q== [fileUNF]
This dataset is composed of 4 files : The file EcologyG1&G2 provides ecological data assessed on the level of each tree (G1 and G2) and derived from a floristic survey. Details about the assessments of the ecological data are provided in Truffaut et al (2017, Article p. 127 and S...
Jul 9, 2021 - URGI Plant and Fungi Dataverse
Jonathan Kreplak; Grégoire Aubert; Magalie Leveugle; Hervé Duborjal; Jean-Philippe Pichon; Judith Burstin, 2021, "Exome capture genotyping data on the pea Architecture Multi-Stress collection (Peamust project)", https://doi.org/10.15454/3QRIPA, Portail Data INRAE, V1
In the context of Work Package 3 of the PeaMUST project , Genotyping data obtained by exome capture on a 240 accessions pea germplasm panel (AMS collection). You need an account to access data, contact urgi-support@inrae.fr and ask for Peamust project Exome capture genotyping dat...
Feb 28, 2020 - URGI Plant and Fungi Dataverse
Papoutsoglou, Evangelia A.; Faria, Daniel; Arend, Daniel; Arnaud, Elizabeth; Athanasiadis, Ioannis N.; Chaves, Inês; Coppens, Frederik; Cornut, Guillaume; Costa, Bruno V.; Ćwiek-Kupczyńska, Hanna; Droesbeke, Bert; Finkers, Richard; Gruden, Kristina; Junker, Astrid; King, Graham J.; Krajewski, Paweł; Lange, Matthias; Laporte, Marie-Angélique; Michotey, Célia; Oppermann, Markus; Ostler, Richard; Poorter, Hendrik; Ramı́rez-Gonzalez, Ricardo; Ramšak, Živa; Reif, Jochen C.; Rocca-Serra, Philippe; Sansone, Susanna-Assunta; Scholz, Uwe; Tardieu, François; Uauy, Cristobal; Usadel, Björn; Visser, Richard G.F.; Weise, Stephan; Kersey, Paul J.; Miguel, Célia M.; Adam-Blondon, Anne-Françoise; Pommier, Cyril, 2020, "Enabling reusability of plant phenomic datasets with MIAPPE 1.1 - Supplementary dataset", https://doi.org/10.15454/1YXVZV, Portail Data INRAE, V1
Exemplar dataset demonstrating the use of MIAPPE as described in "Enabling reusability of plant phenomic datasets with MIAPPE 1.1". Enabling data reuse and knowledge discovery is increasingly critical in modern science, and requires an effort towards standardizing data publicatio...
Jun 17, 2019 - ThaliaDB maize Dataverse
Nicolas, Stephane; Negro, Sandra; Millet, Emilie; Bauland, Cyril; Madur, Delphine; Combes, Valérie; Welcker, Claude; Tardieu, François; Charcosset, Alain, 2019, "DROPS maize GWAS analysis dataset", https://doi.org/10.15454/6TL2N4, Portail Data INRAE, V1
This dataset corresponds to the most significant SNP (-log(p-value)>5) identified by genome-wide association studies between the three traits (Flowering Time, Plant Height, Grain Yield) measured in 22 environments on a panel of 247 maize inbred lines. These analysis were conducte...
Feb 10, 2020 - URGI Plant and Fungi Dataverse
Guillaumie, Sabine; Decroocq, Stéphane; Ollat, Nathalie; Delrot, Serge; Gomès, Eric; Cookson, Sarah, 2020, "Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators", https://doi.org/10.15454/4ZUPCP, Portail Data INRAE, V1
A F2 population consisting of 337 individuals was derived from the inter-specific cross of V. vinifera cv. Cabernet-Sauvignon (CS) x V. riparia cv. Riparia Gloire de Montpellier (RGM). This population, named CS x RGM_F2, resulted from the self-fertilization of the F1_148 individu...
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