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1 to 10 of 82,968 Results
Jul 30, 2021 - URGI Plant and Fungi Dataverse
Florian Maumus, 2021, "Clustered IMG VR v3 file: IMGVR70", https://doi.org/10.15454/RZDFOR, Portail Data INRAE, V1
How this file was created? All proteins (n=66,585,678) were retrieved from IMG/VR v3 database (https://genome.jgi.doe.gov/portal/IMG_VR/IMG_VR.home.html) version IMG_VR_2020-10-12_5.1 (https://doi.org/10.1093/nar/gkaa946). We used MMseqs2 (https://doi.org/10.1038/nbt.3988) for si...
application/gzip - 2.2 GB - MD5: e11a42c80a699529b444f0394724ae2d
MMseqs2 clustered Fasta with 70%identity from IMGVR database
Jul 28, 2021
Vacher, Corinne, 2021, "Statistical analysis scripts to analyze metabarcoding data of fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’)", https://doi.org/10.15454/PL3HWQ, Portail Data INRAE, V2
This archive provides the statistical analysis scripts used to analyze a metabarcoding dataset (available at https://www.ncbi.nlm.nih.gov/bioproject/678415) representing foliar fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvi...
application/gzip - 20.4 KB - MD5: a8cf92f0ed3b21ce26916a98f097470b
Dataset (rarefied ASV table and metadata) for control leaf samples (phyloseq format)
application/gzip - 161.5 KB - MD5: 8844a67329c65f95882d8e918f34c1fc
Dataset (rarefied ASV table and metadata) for inoculated leaf samples (phyloseq format)
application/gzip - 169.5 KB - MD5: 90f97910e2bf9e043cb18b5e7eddb55d
Dataset (rarefied ASV table and metadata) for inoculated leaf samples, after removal of the pathogen Erysiphe necator (phyloseq format)
Jul 22, 2021 - LIPM Dataverse
Carrere, Sebastien, 2021, "Xcc 8004 Re-annotation Bankit Submission Proof", https://doi.org/10.15454/LWBRGR, Portail Data INRAE, V1
Submission Proof to BanKit downloaded from Bankit "Download your completed submissions". Data were submitted to Bankit, June 10th 2021: LOCUS Xcc-8004 5148708 bp DNA linear BCT 10-JUN-2021 DEFINITION Xanthomonas campestris strain 8004. ACCESSION Xcc-8004 VERSION KEYWORDS . SOURCE...
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