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1 to 10 of 111 Results

plasmopara_viticola_INRA-PV221.geneAnnotation.tar.gz Apr 16, 2018 - Genome assembly and annotation of Plasmopara viticola, the grapevine downy mildew pathogen application/gzip - 5.1 MB - MD5: e3b8296e959bb67068878319f84f0523 Gene annotation of the Plasmopara viticola genome. Includes annotation in gff3 format, a fasta file with protein sequences, and training files for augustus.
plasmopara_muralis_INRA-PM001.geneAnnotation.v2.tar.gz Nov 8, 2018 - Genome assembly and annotation of Plasmopara muralis, the downy mildew pathogen on Parthenocissus tricuspidata and Parthenocissus quinquefolia application/gzip - 4.3 MB - MD5: 27b2d2974819f4923daba33af3046ea2 Gene annotation of the Plasmopara muralis genome. Includes annotation in gff3 format, a fasta file with protein sequences, and training files for augustus.
0_Data_outline.pdf Mar 27, 2019 - A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios application/pdf - 1.0 MB - MD5: 1a11142041623c0364c90acae645ae78 This file contains the outline of the files organization and content. It describes the different measurement scales available: Weather and soil water data at daily time step (1). Phenotypic data at the plot level in each experiment (2a) and at the genotypic level in each experime...
3-Indices_GenoEnv_level.tab Mar 27, 2019 - A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios text/tab-separated-values - 1.1 MB - MD5: c16e96530b78b52914132ac45e93c570 This file contains the environmental indices. An environmental index is calculated as the average or the sum of one environmental variable over a genotype-specific phenological phase. The environmental variables used to calculate these indices can be found in the file «1-Env_vari...
7a-Genotyping_50K_41722.tab Mar 27, 2019 - A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios text/tab-separated-values - 19.6 MB - MD5: bd39777b1e0188ba276fac46bbd81652 This file contains the 50K genotyping Matrix tabulated coded in allelic dose (012) filtered and imputed. Genotyping of 41,722 loci on 246 parental lines were obtained using 50K Illumina Infinium HD arrays (Ganal et al., 2011). Genotype were coded in allelic dose with 0 for the mi...
Filtered-ASV-table.tab Jul 30, 2019 - Amplicon Sequence Variant (ASV) table obtained by metabarcoding foliar fungal communities in conventional and organic vineyards text/tab-separated-values - 524.8 KB - MD5: 1d86629dc112dbbbe61eaf6f4ada5844
22nteIFiso4G11_silenced angeleno.fastq.gz Sep 18, 2019 - Japanese plum small RNA sequencing application/gzip - 18.3 MB - MD5: 66c881fd911e779f5af969411589f860 22nt small RNA of transgenic AG 7303-96 eIFiso4G11 silenced Japanese plum (cv. angeleno) non-infected. Files are in fastq format, compressed in .gz
22nteIFiso4G11_silenced angeleno_PPV-D.fastq.gz Sep 18, 2019 - Japanese plum small RNA sequencing application/gzip - 16.1 MB - MD5: 0830e20683aa8b73c9edf6e068c3ed74 22nt small RNA of transgenic AG 7303-96 eIFiso4G11 silenced Japanese plum (cv. angeleno) infected with PPV-D. Files are in fastq format, compressed in .gz
22nteIFiso4G11_silenced angeleno_PPV-M.fastq.gz Sep 18, 2019 - Japanese plum small RNA sequencing application/gzip - 3.2 MB - MD5: a370e94961a4c20dd6219db7d99ee82e 22nt small RNA of transgenic AG 7303-96 eIFiso4G11 silenced Japanese plum (cv. angeleno) infected with PPV-M. Files are in fastq format, compressed in .gz
22ntWTangeleno.fastq.gz Sep 18, 2019 - Japanese plum small RNA sequencing application/x-gzip - 1.9 MB - MD5: 0db39d1dd9d2c4dcc86992701b06dc1b 22nt small RNA of wildtype non-transgenic Japanese plum (cv. angeleno) non-infected. Files are in fastq format, compressed in .gz

plasmopara_viticola_INRA-PV221.geneAnnotation.tar.gz

Apr 16, 2018 - Genome assembly and annotation of Plasmopara viticola, the grapevine downy mildew pathogen

application/gzip - 5.1 MB - MD5: e3b8296e959bb67068878319f84f0523

Gene annotation of the Plasmopara viticola genome. Includes annotation in gff3 format, a fasta file with protein sequences, and training files for augustus.

plasmopara_muralis_INRA-PM001.geneAnnotation.v2.tar.gz

Nov 8, 2018 - Genome assembly and annotation of Plasmopara muralis, the downy mildew pathogen on Parthenocissus tricuspidata and Parthenocissus quinquefolia

application/gzip - 4.3 MB - MD5: 27b2d2974819f4923daba33af3046ea2

Gene annotation of the Plasmopara muralis genome. Includes annotation in gff3 format, a fasta file with protein sequences, and training files for augustus.

0_Data_outline.pdf

Mar 27, 2019 - A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios

application/pdf - 1.0 MB - MD5: 1a11142041623c0364c90acae645ae78

This file contains the outline of the files organization and content. It describes the different measurement scales available: Weather and soil water data at daily time step (1). Phenotypic data at the plot level in each experiment (2a) and at the genotypic level in each experime...

3-Indices_GenoEnv_level.tab

Mar 27, 2019 - A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios

text/tab-separated-values - 1.1 MB - MD5: c16e96530b78b52914132ac45e93c570

This file contains the environmental indices. An environmental index is calculated as the average or the sum of one environmental variable over a genotype-specific phenological phase. The environmental variables used to calculate these indices can be found in the file «1-Env_vari...

7a-Genotyping_50K_41722.tab

Mar 27, 2019 - A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios

text/tab-separated-values - 19.6 MB - MD5: bd39777b1e0188ba276fac46bbd81652

This file contains the 50K genotyping Matrix tabulated coded in allelic dose (012) filtered and imputed. Genotyping of 41,722 loci on 246 parental lines were obtained using 50K Illumina Infinium HD arrays (Ganal et al., 2011). Genotype were coded in allelic dose with 0 for the mi...

Filtered-ASV-table.tab

Jul 30, 2019 - Amplicon Sequence Variant (ASV) table obtained by metabarcoding foliar fungal communities in conventional and organic vineyards

text/tab-separated-values - 524.8 KB - MD5: 1d86629dc112dbbbe61eaf6f4ada5844

22nteIFiso4G11_silenced angeleno.fastq.gz

Sep 18, 2019 - Japanese plum small RNA sequencing

application/gzip - 18.3 MB - MD5: 66c881fd911e779f5af969411589f860

22nt small RNA of transgenic AG 7303-96 eIFiso4G11 silenced Japanese plum (cv. angeleno) non-infected. Files are in fastq format, compressed in .gz

22nteIFiso4G11_silenced angeleno_PPV-D.fastq.gz

Sep 18, 2019 - Japanese plum small RNA sequencing

application/gzip - 16.1 MB - MD5: 0830e20683aa8b73c9edf6e068c3ed74

22nt small RNA of transgenic AG 7303-96 eIFiso4G11 silenced Japanese plum (cv. angeleno) infected with PPV-D. Files are in fastq format, compressed in .gz

22nteIFiso4G11_silenced angeleno_PPV-M.fastq.gz

Sep 18, 2019 - Japanese plum small RNA sequencing

application/gzip - 3.2 MB - MD5: a370e94961a4c20dd6219db7d99ee82e

22nt small RNA of transgenic AG 7303-96 eIFiso4G11 silenced Japanese plum (cv. angeleno) infected with PPV-M. Files are in fastq format, compressed in .gz

22ntWTangeleno.fastq.gz

Sep 18, 2019 - Japanese plum small RNA sequencing

application/x-gzip - 1.9 MB - MD5: 0db39d1dd9d2c4dcc86992701b06dc1b

22nt small RNA of wildtype non-transgenic Japanese plum (cv. angeleno) non-infected. Files are in fastq format, compressed in .gz

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