Omics Dataverse

Featured Dataverses

In order to use this feature you must have at least one published dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

There was an error with your search parameters. Please clear your search and try again.

1 to 10 of 94 Results

GenotypesSNP_G1_G2.tab Dec 9, 2020 - Long term monitoring of evolutionary changes in oak stands text/tab-separated-values - 1.8 MB - MD5: 5741fda1997fc7fe45b01c2c6b57feb5
3_FIR_10DuplicatedLandraces_32788SNPs.tab Dec 8, 2020 - Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array text/tab-separated-values - 40.3 MB - MD5: 4bc959b9571abdab7b789e0291fb3402 Fluorescence Intensity Ratios for 32,788 SNPs on 20 samples corresponding to 10 duplicated landraces. This table has 5 columns with headers as follows: "SNP.Name","Sample.name","X","Y", "RatioObs". These columns correspond to name of SNP, name of sample, fluorescence in...
5_PipelinePredictionDNABulk_MethPubli_inrae.R Dec 8, 2020 - Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array text/x-r-source - 6.0 KB - MD5: 90e666cd6d8619a15288e93046d9b58b - R scripts (Pipeline) that apply R functions (04_Function_PredAllFreqInDNABulk_Publi.R) to two training datasets corresponding to fluorescence intensity data of 327 lines (1_Train_set_327lines_32788SNP.tsv ) and two series of controlled pools (2_Train_set_24pools_TF_1000SNP.tab)...
HGT-summary-portal.tab Aug 18, 2020 - Horizontal gene transfer candidates in M. incognita text/tab-separated-values - 197.2 KB - MD5: 648b8aade271b14125975b9f78709bd2 Summary of HGT candidates and functional annotation. Sheet1: Possible HGT (AI>0). Sheet2: Likely HGT (AI>14). For these, AI and HGT scores are given as well as representative Interpro domain, orthogroup and whether this is a previously reported HGT case. Sheet3: Known HGT in root...
TreeRingData.txt Jun 19, 2020 - Dendrochronology of 661 Quercus robur for SPONFOREST Project text/plain - 1.5 MB - MD5: 2b5be08bb6bae15ef3bcd074152f23f9 14 variables in columns and 21 461 tree rings of Quercus robur 1. Patch : a letter is the name of each of the 15 forest stands 2. Tree : tree name. Example : K_001_A means K = stand, 001 = tree number in this stand, A = name of the cored stem when a tree was multi-stemmed 3. Y...
TreeData.txt Jun 19, 2020 - Dendrochronology of 661 Quercus robur for SPONFOREST Project text/plain - 22.6 KB - MD5: 90db19fe4e1b3fc9cf53ee1851acdb0e 8 variables in columns and 661 lines for cored pedunculate oaks 1. Patch : a letter is the name of each of the 15 forest stands 2. Tree : tree name. Example : K_001_A means K = stand, 001 = tree number in this stand, A = name of the cored stem when a tree was multi-stemmed 3....
a_dXJuOlVSR0kvc3R1ZHkvUE9QWU9NSUNTLVBPUDItRg==_Biological_material.txt Feb 28, 2020 - Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset text/plain - 37.7 KB - MD5: 8f5f391d0d5c8ced473d3c43b162efb7
a_dXJuOlVSR0kvc3R1ZHkvUE9QWU9NSUNTLVBPUDItSQ==_Biological_material.txt Feb 28, 2020 - Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset text/plain - 37.5 KB - MD5: 5df935c3d67f102e1555b9377d5b664d
a_dXJuOlVSR0kvc3R1ZHkvUE9QWU9NSUNTLVBPUDItVUs=_Biological_material.txt Feb 28, 2020 - Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset text/plain - 37.5 KB - MD5: 50f1810a5fcdd9e4204f26a95a3882b0
a_dXJuOlVSR0kvc3R1ZHkvQlRIX09yZ2V2YWxfMjAwNl9URUNI_Biological_material.txt Feb 28, 2020 - Enabling reusability of plant phenomic datasets with MIAPPE 1.1 - Supplementary dataset INRA Wheat text/plain - 8.5 KB - MD5: 2760f61df01c1a33c39fcd7a8c72dbe3

GenotypesSNP_G1_G2.tab

Dec 9, 2020 - Long term monitoring of evolutionary changes in oak stands

text/tab-separated-values - 1.8 MB - MD5: 5741fda1997fc7fe45b01c2c6b57feb5

3_FIR_10DuplicatedLandraces_32788SNPs.tab

Dec 8, 2020 - Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array

text/tab-separated-values - 40.3 MB - MD5: 4bc959b9571abdab7b789e0291fb3402

Fluorescence Intensity Ratios for 32,788 SNPs on 20 samples corresponding to 10 duplicated landraces. This table has 5 columns with headers as follows: "SNP.Name","Sample.name","X","Y", "RatioObs". These columns correspond to name of SNP, name of sample, fluorescence in...

5_PipelinePredictionDNABulk_MethPubli_inrae.R

Dec 8, 2020 - Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array

text/x-r-source - 6.0 KB - MD5: 90e666cd6d8619a15288e93046d9b58b

- R scripts (Pipeline) that apply R functions (04_Function_PredAllFreqInDNABulk_Publi.R) to two training datasets corresponding to fluorescence intensity data of 327 lines (1_Train_set_327lines_32788SNP.tsv ) and two series of controlled pools (2_Train_set_24pools_TF_1000SNP.tab)...

HGT-summary-portal.tab

Aug 18, 2020 - Horizontal gene transfer candidates in M. incognita

text/tab-separated-values - 197.2 KB - MD5: 648b8aade271b14125975b9f78709bd2

Summary of HGT candidates and functional annotation. Sheet1: Possible HGT (AI>0). Sheet2: Likely HGT (AI>14). For these, AI and HGT scores are given as well as representative Interpro domain, orthogroup and whether this is a previously reported HGT case. Sheet3: Known HGT in root...

TreeRingData.txt

Jun 19, 2020 - Dendrochronology of 661 Quercus robur for SPONFOREST Project

text/plain - 1.5 MB - MD5: 2b5be08bb6bae15ef3bcd074152f23f9

14 variables in columns and 21 461 tree rings of Quercus robur 1. Patch : a letter is the name of each of the 15 forest stands 2. Tree : tree name. Example : K_001_A means K = stand, 001 = tree number in this stand, A = name of the cored stem when a tree was multi-stemmed 3. Y...

TreeData.txt

Jun 19, 2020 - Dendrochronology of 661 Quercus robur for SPONFOREST Project

text/plain - 22.6 KB - MD5: 90db19fe4e1b3fc9cf53ee1851acdb0e

8 variables in columns and 661 lines for cored pedunculate oaks 1. Patch : a letter is the name of each of the 15 forest stands 2. Tree : tree name. Example : K_001_A means K = stand, 001 = tree number in this stand, A = name of the cored stem when a tree was multi-stemmed 3....

a_dXJuOlVSR0kvc3R1ZHkvUE9QWU9NSUNTLVBPUDItRg==_Biological_material.txt

Feb 28, 2020 - Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset

text/plain - 37.7 KB - MD5: 8f5f391d0d5c8ced473d3c43b162efb7

a_dXJuOlVSR0kvc3R1ZHkvUE9QWU9NSUNTLVBPUDItSQ==_Biological_material.txt

Feb 28, 2020 - Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset

text/plain - 37.5 KB - MD5: 5df935c3d67f102e1555b9377d5b664d

a_dXJuOlVSR0kvc3R1ZHkvUE9QWU9NSUNTLVBPUDItVUs=_Biological_material.txt

Feb 28, 2020 - Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset

text/plain - 37.5 KB - MD5: 50f1810a5fcdd9e4204f26a95a3882b0

a_dXJuOlVSR0kvc3R1ZHkvQlRIX09yZ2V2YWxfMjAwNl9URUNI_Biological_material.txt

Feb 28, 2020 - Enabling reusability of plant phenomic datasets with MIAPPE 1.1 - Supplementary dataset INRA Wheat

text/plain - 8.5 KB - MD5: 2760f61df01c1a33c39fcd7a8c72dbe3

Add Data

Share Dataverse

Link Dataverse

Reset Modifications