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1 to 10 of 81,165 Results
Jan 22, 2021
Rué, Olivier, 2021, "Test dataset for assessment FROGS 16S amplicon methodology", https://doi.org/10.15454/VGVCIJ, Portail Data INRAE, V1
Grinder (v.0.5.3) (Angly, et al., 2012) was used to simulate the PCR amplification of fulllength (V3V4 and V4) sequences from reference databases. We generated 25 sets of species manually extracted from UTAX (Simulated Data From UTAX = SDFU) and 25 others from SILVA (v123) databa...
Jan 21, 2021
Rué, Olivier, 2021, "Test dataset for assessment FROGS ITS methodology", https://doi.org/10.15454/AOT7UL, Portail Data INRAE, V1
Our objective was to create datasets allowing, among other things, to test methods and tools to process data from Fungi metabarcoding sequencing. Consequently, we have computer-generated reads of 250 nucleotides in length from artificial PCRs produced with the Grinder software on...
Jan 13, 2021 - Metabarcoding
Frigerio, Jean-Marc; Caron, Henri; Sabatier, Daniel; Molino, Jean-François; Franc, Alain, 2021, "Guiana Trees", https://doi.org/10.15454/XSJ079, Portail Data INRAE, V1
Contains information which has been built for comparing molecular diversity and botanical classification of about 1500 trees in French Guiana. Contains - a fasta file of sequences - a character file with taxonomy per sequence - a distance file of pairwise SW distances between seq...
Jan 12, 2021 - PMB Metabolomics
Urrutia, Maria; Deborde, Catherine; Maucourt, Mickaël; Jacob, Daniel; Moing, Annick, 2020, "NMR metabolomic analyses of young leaf of maize plants cultivated in a growth-chamber", https://doi.org/10.15454/F2CZ1R, Portail Data INRAE, V2, UNF:6:JLr9hp6WBch6p26RVNsGNA== [fileUNF]
NMR metabolomic analyses of young leaf of maize plants cultivated in a growth-chamber. Analyses performed on 18 genetically-diverse hybrids using proton-NMR of leaf extracts.
Jan 11, 2021 - SunfloDry
Berton Thierry; Bernillon Stéphane; Fernandez Olivier; Flandin Amélie; Cassan Cédric, 2021, "Data set for LC-MS", https://doi.org/10.15454/2KOXOH, Portail Data INRAE, V1, UNF:6:62LTiBw26cRpzV61YjY4iA== [fileUNF]
Metabolomic analyses of leaf of sunflower plants cultivated outdoors in a phenotyping facility in well-watered or water-deficit conditions. Analyses performed on 24 genotypes (8 lines and their corresponding 16 hybrids) using LC-Orbitrap-MS of leaf extracts.
Jan 11, 2021 - SunfloDry
Fernandez Olivier; Gibon Yves; Flandin Amélie; Cassan Cédric, 2021, "Data set for targeted analyses", https://doi.org/10.15454/STJH47, Portail Data INRAE, V1
Analyses of major compounds of leaf of sunflower plants cultivated outdoors in a phenotyping facility in well-watered or water-deficit conditions. Analyses performed on 24 genotypes (8 lines and their corresponding 16 hybrids) using targeted robotized analyses of leaf extracts.
Jan 8, 2021 - Metabolomic responses of maize leaf to progressive controlled chilling
Urrutia, Maria; Bernillon, Stéphane; Moing, Annick, 2020, "LC-MS metabolomic analyses of maize young leaf cultivated in a growth chamber", https://doi.org/10.15454/J9KO72, Portail Data INRAE, V2, UNF:6:HTEu5gdg6G3uO2MDAMHGWQ== [fileUNF]
Analyses performed on 18 genetically-diverse hybrids using leaf methanolic extracts.
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphael-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Legumes submission file", https://doi.org/10.15454/J9RN5S, Portail Data INRAE, V1
Submission file of Legumes botanic family (16 proto-chromosomes) in PlantSyntenyViewer
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphael-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Brassicaea submission file", https://doi.org/10.15454/DKXVAC, Portail Data INRAE, V1
Submission file of Brassicaea botanic family (8 proto-chromosomes) in PlantSyntenyViewer
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphael-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Solanaceae submission file", https://doi.org/10.15454/TRBVMD, Portail Data INRAE, V1
Submission file of Solanaceae botanic family (17 proto-chromosomes) in PlantSyntenyViewer
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