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1 to 10 of 158 Results
Sep 15, 2021 - Biogeco Dataverse
Ehrenmann, Francois; Chaumeil,Philippe; Plomion, Christophe, 2021, "Plan de Gestion de Données UMR BIOGECO", https://doi.org/10.15454/XS1RPM, Portail Data INRAE, V3
Plan de gestion des données de l'UMR INRAE BIOGECO Vous pouvez citer le DOI de ce plan comme source, mais l'utilisation de toute partie mise à jour de ce plan n'implique pas que le(s) créateur(s) soutienne(nt) ou ait(nt) un quelconque lien avec votre projet ou votre soumission. C...
Sep 13, 2021
Le Chatelier, Emmanuelle; Almeida, Mathieu; Plaza Oñate, Florian; Pons, Nicolas; Gauthier, Franck; Ghozlane, Amine; Ehrlich, Stanislav Dusko; Witherden, Elizabeth; Gomez-Cabrero, David, 2021, "A catalog of genes and species of the human oral microbiota", https://doi.org/10.15454/WQ4UTV, Portail Data INRAE, V2, UNF:6:Bd2wTRePL+8xQgnahkG5CA== [fileUNF]
A catalog of genes and species of the human oral microbiota
Sep 13, 2021
Plaza Onate, Florian; Pons, Nicolas; Gauthier, Franck; Almeida, Mathieu; Ehrlich, Stanislav Dusko; Le Chatelier, Emmanuelle, 2021, "Updated Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota", https://doi.org/10.15454/FLANUP, Portail Data INRAE, V2, UNF:6:FWhI4eW+F6Bx/iR6cF7tcA== [fileUNF]
Updated Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota built by binning co-abundant genes of the IGC2 catalog with MSPminer. MSPs were used to estimate species abundance and perform functional analysis in the Human Gut Microbiome Atlas For more in...
Aug 30, 2021
Yanibada, Bénédict; Boudra, Hamid; Morgavi, Diego P., 2021, "Supporting data for "Milk metabolome reveals variations on enteric methane emissions from dairy cows fed a specific inhibitor of the methanogenesis pathway"", https://doi.org/10.15454/UUZIGD, Portail Data INRAE, V1, UNF:6:TlZ1MEaEuFxLgr/MjotdsQ== [fileUNF]
Supplementary information containing figures, tables and tabulated data for "Milk metabolome reveals variations on enteric methane emissions from dairy cows fed a specific inhibitor of the methanogenesis pathway"
Aug 23, 2021
Larue, Clement, 2021, "Intensive study site: INRAE chestnut germplasm collection (Domaine de la Grande Ferrade, Villenave d'Ornon)", https://doi.org/10.15454/GSJSWW, Portail Data INRAE, V9, UNF:6:ukulwpHEBuz9kZIrsE8SIQ== [fileUNF]
This intensive study plot is located in Villenave d’Ornon, near Bordeaux in southwestern France (44.788319 N, -0.577062 E). It includes the INRAE chestnut germplasm collection and all isolated trees located in the immediate surroundings (<1 km from the INRAE research site). The g...
Jul 30, 2021 - URGI Plant and Fungi Dataverse
Florian Maumus, 2021, "Clustered IMG VR v3 file: IMGVR70", https://doi.org/10.15454/RZDFOR, Portail Data INRAE, V1
How this file was created? All proteins (n=66,585,678) were retrieved from IMG/VR v3 database (https://genome.jgi.doe.gov/portal/IMG_VR/IMG_VR.home.html) version IMG_VR_2020-10-12_5.1 (https://doi.org/10.1093/nar/gkaa946). We used MMseqs2 (https://doi.org/10.1038/nbt.3988) for si...
Jul 28, 2021 - Omics Dataverse
Vacher, Corinne, 2021, "Statistical analysis scripts to analyze metabarcoding data of fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’)", https://doi.org/10.15454/PL3HWQ, Portail Data INRAE, V2
This archive provides the statistical analysis scripts used to analyze a metabarcoding dataset (available at https://www.ncbi.nlm.nih.gov/bioproject/678415) representing foliar fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvi...
Jul 23, 2021
Totozafy, Jean Chrisologue; Boutet, Stephanie; Perreau, François; Mouille, Grégory; Lepiniec, Loïc; Corso, Massimiliano, 2021, "Untargeted lipidomic analyses on seeds of two Camelina sativa varieties cultivated for five consecutive years", https://doi.org/10.15454/ODKCCS, Portail Data INRAE, V1, UNF:6:VO9NqhONY+6xwU81KeTn9Q== [fileUNF]
Samples collection: Six different cultivars of camelina were grown at the experimental farm of Bologna University (Italy) located in Cadriano (Bologna, Italy, 44°30′N, 11°23′E, 32 m a.s.l.) during five consecutive years (2015 - 2019). The six tested cultivars were: MIDAS (AAFC, S...
Jul 22, 2021 - LIPM Dataverse
Carrere, Sebastien, 2021, "Xcc 8004 Re-annotation Bankit Submission Proof", https://doi.org/10.15454/LWBRGR, Portail Data INRAE, V1
Submission Proof to BanKit downloaded from Bankit "Download your completed submissions". Data were submitted to Bankit, June 10th 2021: LOCUS Xcc-8004 5148708 bp DNA linear BCT 10-JUN-2021 DEFINITION Xanthomonas campestris strain 8004. ACCESSION Xcc-8004 VERSION KEYWORDS . SOURCE...
Jul 9, 2021 - Experimental - Observation - Simulation Dataverse
Bénard, Camille; Biais, Benoit; Ballias, Patricia; Beauvoit, Bertrand; Bernillon, Stéphane; Cabasson, Cécile; Colombié, Sophie; Deborde, Catherine; Gaillard, Pierre; Génard, Michel; Gibon, Yves; Jacob, Daniel; Maucourt, Mickael; Moing, Annick; Vercambre, Gilles, 2018, "FRIM - Fruit Integrative Modelling", https://doi.org/10.15454/95JUTK, Portail Data INRAE, V6
The project aimed to build a virtual tomato fruit that enables the prediction of metabolite levels given genetic and environmental inputs, by an iterative process between laboratories which combine expertise in fruit biology, ecophysiology, theoretical and experimental biochemist...
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