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21 to 30 of 168 Results
Apr 6, 2021
Plaza Onate, Florian; Pons, Nicolas; Gauthier, Franck; Almeida, Mathieu; Ehrlich, Stanislav Dusko; Le Chatelier, Emmanuelle, 2021, "Updated Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota",, Portail Data INRAE, V1, UNF:6:FWhI4eW+F6Bx/iR6cF7tcA== [fileUNF]
Updated Metagenomic Species Pan-genomes (MSPs) of the human gastrointestinal microbiota built by binning co-abundant genes of the IGC2 catalog with MSPminer. MSPs were used to estimate species abundance and perform functional analysis in the Human Gut Microbiome Atlas For more in...
Mar 31, 2021
Dutech, Christian Cyril; Demené, Arthur, 2021, "Chromosomal rearrangements but no change of genes and transposable elements repertoires in an invasive forest-pathogenic fungus",, Portail Data INRAE, V1
We present a new de-novo whole-genome assembly obtained from a high quality DNA extraction and long-reads sequencing Nanopore technology obtained from an isolate sampled in the native Japanese area of the species. The comparison with a recently published reference genome showed n...
Mar 26, 2021
Monnet, Christophe, 2021, "Supplemental material - publication Irlinger and Monnet, 2021 - JDS",, Portail Data INRAE, V1, UNF:6:OKACxXd6i6ZlT+7Avg2crw== [fileUNF]
Supplemental table S1 (Proportion of bacterial or fungal operational taxonomic units (OTUs) in the samples (%)) and supplemental figure S1 (Alpha-diversity indices of bacterial communities during cheese-making and storage). Publication title: Temporal differences in microbial com...
Mar 19, 2021 - Vocabulaires Ouverts
DipSO, 2021, "Thésaurus INRAE",, Portail Data INRAE, V1
Thésaurus ouvert et partagé couvrant les domaines de recherche d’INRAE. Il sert de référentiel au sein de l’institut pour indexer et annoter des documents, pages web, descriptions d’activités, jeux de données, à des fins de recherche ou d’analyse de l’information. En savoir plus...
Mar 16, 2021
Paës, Charlotte; Combes, Sylvie, 2021, "Impact of feeding strategies on young rabbit and its gut microbiota",, Portail Data INRAE, V1, UNF:6:DsLiKGnH0sWpIvEukeFaTA== [fileUNF]
You will find all the datasets presented in the study of Paës et al, "Establishment of hindgut bacterial ecosystems and acquisition of microbial functions in the infant rabbit: impact of early-life nutrition and polysaccharides ingestion" and described in the data paper "Multiomi...
Mar 9, 2021
Larue, Clement, 2021, "Development of SNP markers for the identification of chestnut species, hybrids and varieties",, Portail Data INRAE, V2, UNF:6:eJQwJJ12X/74swiSKl9V2A== [fileUNF]
Three chestnut species (Castanea sativa, Castanea crenata and Castanea mollissima) and their hybrids have been massively planted worldwide for nut production. To better study and manage these trees, we identified nuclear single nucleotide polymorphism (SNP) markers using restrict...
Feb 16, 2021 - URGI Plant and Fungi Dataverse
Michotey, Celia, 2021, "Plant Bioinformatics Facility data management plan",, Portail Data INRAE, V1
Data management plan of the Plant Bioinformatics Facility, hosted at URGI. Copyrights The creator(s) of this plan accept(s) that all or part of the text may be reused and personalized if necessary for another plan. You can cite this plan’s DOI as the source, but the use of any up...
Feb 12, 2021
Zytnicki, Matthias, 2021, "Synthetic dataset used for validating srnadiff",, Portail Data INRAE, V1
This dataset contains all the mapped reads generated to validate the tool srnadiff on a synthetic dataset, where the "truth" is known. Samples 1 to 6 are supposed to be one condition, and samples 7 to 12 are the other condition. The file "diffVal.bed" contains the differentially...
Feb 10, 2021 - Duck Liver RNA Sequencing
Diot, Christian, 2021, "Duck Liver RNA Sequencing",, Portail Data INRAE, V1, UNF:6:cjneXSKemM/08MgBS5Rvhw== [fileUNF]
Liver RNA-seqencing of common Pekin, Muscovy, mule and hinny ducks fed ad libitum or overfed
Duck Liver RNA Sequencing (INRA - Institut National de la Recherche Agronomique)
Feb 10, 2021PEGASE
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