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Jun 17, 2021 - UMR IGEPP
Bianchetti, Gregoire; Clouet, Vanessa; Legeai, Fabrice; Baron, Cécile; Gazengel, Kévin; Carrillo, Aurélien; Maria J. Manzanares-Dauleux, M-J; Buitink, Julia; Nesi, Nathalie, 2021, "RNA sequencing data for responses to drought stress and/or clubroot pathogen infection in developing seeds of Brassica napus", https://doi.org/10.15454/9OXYM5, Portail Data INRAE, V1, UNF:6:qcdgw+H/MakBEnbMc4Pxew== [fileUNF]
Oilseed rape (Brassica napus L.) is the third largest oil crop worldwide. Like other crops, oilseed rape faces unfavorable environmental conditions resulting from multiple and combined actions of abiotic and biotic constraints that occur throughout the growth cycle. In particular...
Jun 17, 2021
Morvan, Thierry; Gogé, Fabien; Fouad, Youssef; Oboyet, Thierry; Carel, Odile, 2021, "A dataset of the chemical composition and near-infrared spectroscopy measurements of raw cattle, poultry and pig manure", https://doi.org/10.15454/E1JI8U, Portail Data INRAE, V1, UNF:6:UkTiEdYCqRnahVIoz38nCQ== [fileUNF]
The dataset is composed of chemical analysis results and the NIR spectra of 490 solid animal organic waste products that were collected in 2 campaigns conducted in 2018 and 2019. The sampling was designed to capture the large diversity of animal species (mainly cattle, pigs and p...
text/tab-separated-values - 49.7 KB - MD5: 307ba18a40afdbfab48edf51e430cbed
Id_sample Sample identification number LAT_WGS84 Latitude of the sampling point LONG_WGS84 Longitude of the sampling point Manure_type Manure type DM Dry matter content (%) OM Organic matter content (g kg-1 w.w.) AN Ammonium nitrogen content (g N kg-1 w.w.) Total_N Total nitrogen...
text/tab-separated-values - 5.2 MB - MD5: 45840b16f6e101323853780f82ba48f7
The first column contains the sample identification number, and the other columns contain the absorbance data recorded from 802-2502 nm
Jun 16, 2021
Plancade, Sandra, 2021, "A combined test for feature selection on sparse metaproteomics data - Scripts and data", https://doi.org/10.15454/ZSREJA, Portail Data INRAE, V1, UNF:6:s3xarg1knpBProC/fz0tYw== [fileUNF]
These scripts implement the combined test for feature selection in multi-class comparison from data with missing values, presented in Plancade, Berland et al (2021). The test combines a Fisher test for difference in terms of missingness between classes, and a t-test (for two clas...
type/x-r-syntax - 19.8 KB - MD5: dd90e2e2eaf769047352d6b63ff53fd4
Functions to implement the analyses of Plancade, Berland et al (2021).
type/x-r-syntax - 10.2 KB - MD5: 4b67d48499969652ff892887d61fb33e
Functions which implement the combined test as well as the imputation-based FSMs using t-test, with imputation based on KNN, SVD and single value imputation (see details in Plancade,Berland et al (2021)).
text/tab-separated-values - 1.1 KB - MD5: 4dae81844b08859cda1ec532fb2b481d
Patient groups corresponding to columns 2 to 100 in Proteocardis-cyto-proteins-XIC-intensities
text/tab-separated-values - 18.8 MB - MD5: ffccf100ad31039f2e0fd464297be884
XIC intensities of proteins in the cytosolic fraction for 99 patients from the Proteocardis cohort.
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