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31 to 40 of 60 Results
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne, 2020, "M. incognita candidate effector proteins", https://doi.org/10.15454/CSTXU2, Portail Data INRAE, V1
Accession numbers of M. incognita candidate effectors. These proteins are predicted to be secreted based on the presence of a signal peptide for secretion and absence of transmembrane domains. Furthermore at least one motif known to be enriched in effector proteins is present in...
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne, 2020, "M. incognita predicted secreted proteins", https://doi.org/10.15454/JCYZDI, Portail Data INRAE, V1
To identify putative secreted proteins in the M. incognita protein set (Blanc-Mathieu et al. 2017), we searched for predicted signal peptides (SP) for secretion using SignalP v4 (Petersen, Brunak, von Heijne, & Nielsen, 2011). This program improves the differentiation between tra...
Jul 3, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne; Da Rocha, Martine, 2020, "M. incognita protein-coding genes expression patterns", https://doi.org/10.15454/YM2DHE, Portail Data INRAE, V1
M. incognita protein-coding genes expression values across 4 life stages in triplicates. Life stages are as follows: - W: eggs - J2: pre-parasitic infective juveniles - J3: infective juveniles (mic of late J2, J3 and J4) - Fem: adult female Two tables are given, one with the raw...
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne, 2020, "M. incongnita proteins specific to plant-parasitic nemaotdes", https://doi.org/10.15454/I9MWRS, Portail Data INRAE, V1
Accession numbers of M. incognita predicted proteins having predicted homologs only in other plant-parasitic nematodes (PPN) or being M. incognita-specific.
Jun 23, 2020 - Allocation Viande
Wilfart, Aurelie, 2020, "MeatPartTool project: Final report", https://doi.org/10.15454/NVUKQU, Portail Data INRAE, V1
This report is the final report of the project MeatPartTool. This report gives some methodological issues on LCA applied to meat-products, and explains the major hypothesis to calculate the allocation factors. The software, the database and the major results are described
Jun 23, 2020 - Allocation Viande
Wilfart, Aurelie, 2020, "MeatPartTool Software: Tutorial", https://doi.org/10.15454/R5JDYX, Portail Data INRAE, V1
This report explain how to deal with the MeatPartTool software : - settings and first launch - Interface description - Opening an existing database - Selection of an individual - Access to allocation factors - Create a new individual
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne, 2020, "MERCI effector-enriched motifs in the 100 first amino acids of M. incognita proteins", https://doi.org/10.15454/LMY6LV, Portail Data INRAE, V1
MERCI effector-enriched motifs in the 100 first amino acids of M. incognita proteins M. incognita proteins with at least one of the 4 motifs identified as enriched in the known effector proteins as described in (Vens, Rosso, Danchin, Bioinformatics, 2011)
Feb 17, 2020 - Data-OLA Dataverse
Monet, Ghislaine; Barbet,Denis, 2020, "Metadata of OLA-IS : information system of the lakes observatory.", https://doi.org/10.15454/5QERF6, Portail Data INRAE, V1
The IS-OLA user will find here some informations on the sites studied (geographic coordinates), the names of the variables and units, pictures of some lakes and other general information. Further information can be find on Anaee-F metadatas web site: For Lake Annecy : http://w3.a...
Apr 6, 2020 - UR SOLS
Pasquier, Catherine; Ayzac, Adeline; Carozzi, Marco; Giot, Guillaume; Goubard-Delaunay Yolaine; Moinard, Victor; Savoie, Antoine, 2019, "Metametha dataset", https://doi.org/10.15454/5MOZKJ, Portail Data INRAE, V2, UNF:6:E4YS2BXkFYIqsJNFBh4KOg== [fileUNF]
Comparison of N fluxes (N20, NH3, NO3 …) between 5 fertilization managements : livestock effluents, digestates and mineral nitrogen. This dataset was collected in part of Metametha project, funded by ADEME. During three years (2017,2019 and 2019) measurements were made in soil, w...
May 29, 2020
Laguerre, Sandrine, 2020, "MINTIA paper Biological samples", https://doi.org/10.15454/AH8CRS, Portail Data INRAE, V1
Reads corresponding to the biological samples initially analysed in "Investigating Host Microbiota Relationships Through Functional Metagenomics" of Laville et al and used to validate MINTIA pipeline on biological samples. The assembled and annotated fosmids of Laville et al are...
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