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Type: (datasets) Publication Year: 2019

9,671 to 9,679 of 9,679 Results

Above and belowground biomass data for a set of beech trees of different age and crown classes sampled in Hesse state forest (NE France) with a view to analyzing the distribution and the allocation of biomass in the tree Jun 13, 2019 - Experimental - Observation - Simulation Dataverse Le Goff, Noël, 2019, "Above and belowground biomass data for a set of beech trees of different age and crown classes sampled in Hesse state forest (NE France) with a view to analyzing the distribution and the allocation of biomass in the tree", https://doi.org/10.15454/8CLEGO, Portail Data INRAE, V1, UNF:6:HDb+DRUgMjU4MmuN/sKVVA== [fileUNF] A first set (samples 1 and 2 in the data tables) comprising 23 beech (Fagus sylvatica L.) trees of different crown classes (dominant, co-dominant, intermediate, suppressed), aged 30 in average, was selected and felled in 1996-1997 in a compartment of the state forest of Hesse (NE...
A ready-to-use database for DADA2: Diat.barcode_rbcL_312bp_DADA2 Mar 5, 2019 - CARRTEL Dataverse Keck, François; Rimet, Frédéric; Vasselon, Valentin; Bouchez, Agnès, 2019, "A ready-to-use database for DADA2: Diat.barcode_rbcL_312bp_DADA2", https://doi.org/10.15454/HNI1EK, Portail Data INRAE, V1 This database is an adaptation for DADA2 of : Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnès, 2018, "Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)", https://doi.org/10.15454/HYRVUH, Portail Data Inra, V1 This versio...
A novel histologic approach to quantify the intra-annual dynamics of carbon sequestration in spruce forming wood Feb 14, 2019 Andrianantenaina, Anjy Nandrianina; Rathgeber, Cyrille B. K.; Pérez-de-Lis, Gonzalo; Cuny, Henri; Ruelle, Julien, 2019, "A novel histologic approach to quantify the intra-annual dynamics of carbon sequestration in spruce forming wood", https://doi.org/10.15454/PINS1H, Portail Data INRAE, V1, UNF:6:mExKB5WfrTGbk9DrjPmioQ== [fileUNF] The dataset is compoused of two main variables (xylem radial increment measured along three radial files M1-M2-M3, and cell wall proportion CWP measured in the forming xylem) needed in a novel histologic approach to estimate the intra-annual dynamics of stem radial growth and abo...
A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios Nov 5, 2019 - URGI Plant and Fungi Dataverse Millet, Emilie J.; Pommier, Cyril; Buy, Mélanie; Nagel, Axel; Kruijer, Willem; Welz-Bolduan, Therese; Lopez, Jeremy; Richard, Cécile; Racz, Ferenc; Tanzi, Franco; Spitkot, Tamas; Canè, Maria-Angela; Negro, Sandra S.; Coupel-Ledru, Aude; Nicolas, Stéphane D.; Palaffre, Carine; Bauland, Cyril; Praud, Sébastien; Ranc, Nicolas; Presterl, Thomas; Bedo, Zoltan; Tuberosa, Roberto; Usadel, Björn; Charcosset, Alain; van Eeuwijk, Fred A.; Draye, Xavier; Tardieu, François; Welcker, Claude, 2019, "A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios", https://doi.org/10.15454/IASSTN, Portail Data INRAE, V2, UNF:6:zF9w0A2f+MHeW7maeeXJWA== [fileUNF] This dataset comes from the European Union project DROPS (DROught-tolerant yielding PlantS). A panel of 256 maize hybrids was grown with two water regimes (irrigated or rainfed), in seven fields in 2012 and 2013, respectively, spread along a climatic transect from western to east...
A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained with the GrapeReSeq 18K Vitis chip May 21, 2019 - URGI Plant and Fungi Dataverse Le Paslier, Marie-Christine; Choisne, Nathalie; Bacilieri, Roberto; Boursiquot, Jean-Michel; Bras, Marc; Brunel, Dominique; Chauveau, Aurélie; Hausmann, Ludger; Lacombe, Thierry; Laucou, Valérie; Launay, Amandine; Marchal, Cécile; Martinez-Zapater, José-Miguel; Berard, Aurélie; Quesneville, Hadi; Töpfer, Reinhard; Torres-Perez, Rafael; Adam-Blondon, Anne-Françoise, 2019, "A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained with the GrapeReSeq 18K Vitis chip", https://doi.org/10.15454/9RUCEP, Portail Data INRAE, V3 The dataset, comprising 9.896 SNPs for 112 wild grapes (Vitis vinifera subsp. sylvestris), is made available here in support of the paper : Ramos-Madrigal J, Wiborg Runge AK, Bouby L, Lacombe T, Samaniego-Castruita JA, Adam-Blondon AF, Figueiral I, Hallavant C, Martínez-Zapater J...
A collection of 3D images of Arabidopsis thaliana cell nuclei Jul 11, 2019 - Experimental - Observation - Simulation Dataverse Gaudin, Valerie; Andrey, Philippe, 2019, "A collection of 3D images of Arabidopsis thaliana cell nuclei", https://doi.org/10.15454/1HSOIE, Portail Data INRAE, V1 This dataset contains >200 images of nuclei from Arabidopsis thaliana plantlets. Nuclei were isolated and DAPI-stained prior to confocal imaging. See reference Andrey et al 2010 below for further details on sample preparation and imaging protocols. Following imaging, the images w...
70 highly validated SNP markers for Quercus ilex Sep 26, 2019 Bonal, Raúl; Guichoux, Erwan; Delcamp, Adline; Laizet, Yec'han; Hampe, Arndt, 2019, "70 highly validated SNP markers for Quercus ilex", https://doi.org/10.15454/AOVOO2, Portail Data INRAE, V1 70 highly validated SNP markers for Quercus ilex developped from ddRAD-Seq data following Garcia et al., 2018. PCR primer sequences and single base extension primers for MassArray analysis are provided.
3D dynamic statistical atlasing of cellular parameters during leaf morphogenesis. Apr 9, 2019 Selka, Faiçal; Burguet, Jasmine; Blein, Thomas; Biot, Eric; Laufs, Patrick; Andrey, Philippe, 2019, "3D dynamic statistical atlasing of cellular parameters during leaf morphogenesis.", https://doi.org/10.15454/SJAQND, Portail Data INRAE, V1 The movie shows the dynamic reconstruction of the developmental trajectory of a leaf from a collection of fixed 3D samples at successive developmental stages. Averages of cell volumes measured on individual organs are mapped using false colors. The algorithmic reconstruction was...
1D 1H-NMR profiling of 8 fleshy fruits (mixed-stage samples) Jun 11, 2020 - PMB Metabolomics Deborde, Catherine; Roch, Léa; Moing, Annick; Jacob, Daniel, 2019, "1D 1H-NMR profiling of 8 fleshy fruits (mixed-stage samples)", https://doi.org/10.15454/BQHGR9, Portail Data INRAE, V3, UNF:6:CVoLl0fa9rXcSn5u2yGRmQ== [fileUNF] 1D 1H-NMR metabolomic profiling of 8 fleshy fruit species, including three herbaceous species, eggplant, pepper and cucumber, three tree species, apple, peach and clementine, and two vines, kiwifruit and grape. “stage-mixture sample”, dedicated to the identification of major solu...

Above and belowground biomass data for a set of beech trees of different age and crown classes sampled in Hesse state forest (NE France) with a view to analyzing the distribution and the allocation of biomass in the tree

Jun 13, 2019 - Experimental - Observation - Simulation Dataverse

Le Goff, Noël, 2019, "Above and belowground biomass data for a set of beech trees of different age and crown classes sampled in Hesse state forest (NE France) with a view to analyzing the distribution and the allocation of biomass in the tree", https://doi.org/10.15454/8CLEGO, Portail Data INRAE, V1, UNF:6:HDb+DRUgMjU4MmuN/sKVVA== [fileUNF]

A first set (samples 1 and 2 in the data tables) comprising 23 beech (Fagus sylvatica L.) trees of different crown classes (dominant, co-dominant, intermediate, suppressed), aged 30 in average, was selected and felled in 1996-1997 in a compartment of the state forest of Hesse (NE...

A ready-to-use database for DADA2: Diat.barcode_rbcL_312bp_DADA2

Mar 5, 2019 - CARRTEL Dataverse

Keck, François; Rimet, Frédéric; Vasselon, Valentin; Bouchez, Agnès, 2019, "A ready-to-use database for DADA2: Diat.barcode_rbcL_312bp_DADA2", https://doi.org/10.15454/HNI1EK, Portail Data INRAE, V1

This database is an adaptation for DADA2 of : Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnès, 2018, "Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)", https://doi.org/10.15454/HYRVUH, Portail Data Inra, V1 This versio...

A novel histologic approach to quantify the intra-annual dynamics of carbon sequestration in spruce forming wood

Feb 14, 2019

Andrianantenaina, Anjy Nandrianina; Rathgeber, Cyrille B. K.; Pérez-de-Lis, Gonzalo; Cuny, Henri; Ruelle, Julien, 2019, "A novel histologic approach to quantify the intra-annual dynamics of carbon sequestration in spruce forming wood", https://doi.org/10.15454/PINS1H, Portail Data INRAE, V1, UNF:6:mExKB5WfrTGbk9DrjPmioQ== [fileUNF]

The dataset is compoused of two main variables (xylem radial increment measured along three radial files M1-M2-M3, and cell wall proportion CWP measured in the forming xylem) needed in a novel histologic approach to estimate the intra-annual dynamics of stem radial growth and abo...

A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios

Nov 5, 2019 - URGI Plant and Fungi Dataverse

Millet, Emilie J.; Pommier, Cyril; Buy, Mélanie; Nagel, Axel; Kruijer, Willem; Welz-Bolduan, Therese; Lopez, Jeremy; Richard, Cécile; Racz, Ferenc; Tanzi, Franco; Spitkot, Tamas; Canè, Maria-Angela; Negro, Sandra S.; Coupel-Ledru, Aude; Nicolas, Stéphane D.; Palaffre, Carine; Bauland, Cyril; Praud, Sébastien; Ranc, Nicolas; Presterl, Thomas; Bedo, Zoltan; Tuberosa, Roberto; Usadel, Björn; Charcosset, Alain; van Eeuwijk, Fred A.; Draye, Xavier; Tardieu, François; Welcker, Claude, 2019, "A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios", https://doi.org/10.15454/IASSTN, Portail Data INRAE, V2, UNF:6:zF9w0A2f+MHeW7maeeXJWA== [fileUNF]

This dataset comes from the European Union project DROPS (DROught-tolerant yielding PlantS). A panel of 256 maize hybrids was grown with two water regimes (irrigated or rainfed), in seven fields in 2012 and 2013, respectively, spread along a climatic transect from western to east...

A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained with the GrapeReSeq 18K Vitis chip

May 21, 2019 - URGI Plant and Fungi Dataverse

Le Paslier, Marie-Christine; Choisne, Nathalie; Bacilieri, Roberto; Boursiquot, Jean-Michel; Bras, Marc; Brunel, Dominique; Chauveau, Aurélie; Hausmann, Ludger; Lacombe, Thierry; Laucou, Valérie; Launay, Amandine; Marchal, Cécile; Martinez-Zapater, José-Miguel; Berard, Aurélie; Quesneville, Hadi; Töpfer, Reinhard; Torres-Perez, Rafael; Adam-Blondon, Anne-Françoise, 2019, "A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained with the GrapeReSeq 18K Vitis chip", https://doi.org/10.15454/9RUCEP, Portail Data INRAE, V3

The dataset, comprising 9.896 SNPs for 112 wild grapes (Vitis vinifera subsp. sylvestris), is made available here in support of the paper : Ramos-Madrigal J, Wiborg Runge AK, Bouby L, Lacombe T, Samaniego-Castruita JA, Adam-Blondon AF, Figueiral I, Hallavant C, Martínez-Zapater J...

A collection of 3D images of Arabidopsis thaliana cell nuclei

Jul 11, 2019 - Experimental - Observation - Simulation Dataverse

Gaudin, Valerie; Andrey, Philippe, 2019, "A collection of 3D images of Arabidopsis thaliana cell nuclei", https://doi.org/10.15454/1HSOIE, Portail Data INRAE, V1

This dataset contains >200 images of nuclei from Arabidopsis thaliana plantlets. Nuclei were isolated and DAPI-stained prior to confocal imaging. See reference Andrey et al 2010 below for further details on sample preparation and imaging protocols. Following imaging, the images w...

70 highly validated SNP markers for Quercus ilex

Sep 26, 2019

Bonal, Raúl; Guichoux, Erwan; Delcamp, Adline; Laizet, Yec'han; Hampe, Arndt, 2019, "70 highly validated SNP markers for Quercus ilex", https://doi.org/10.15454/AOVOO2, Portail Data INRAE, V1

70 highly validated SNP markers for Quercus ilex developped from ddRAD-Seq data following Garcia et al., 2018. PCR primer sequences and single base extension primers for MassArray analysis are provided.

3D dynamic statistical atlasing of cellular parameters during leaf morphogenesis.

Apr 9, 2019

Selka, Faiçal; Burguet, Jasmine; Blein, Thomas; Biot, Eric; Laufs, Patrick; Andrey, Philippe, 2019, "3D dynamic statistical atlasing of cellular parameters during leaf morphogenesis.", https://doi.org/10.15454/SJAQND, Portail Data INRAE, V1

The movie shows the dynamic reconstruction of the developmental trajectory of a leaf from a collection of fixed 3D samples at successive developmental stages. Averages of cell volumes measured on individual organs are mapped using false colors. The algorithmic reconstruction was...

1D 1H-NMR profiling of 8 fleshy fruits (mixed-stage samples)

Jun 11, 2020 - PMB Metabolomics

Deborde, Catherine; Roch, Léa; Moing, Annick; Jacob, Daniel, 2019, "1D 1H-NMR profiling of 8 fleshy fruits (mixed-stage samples)", https://doi.org/10.15454/BQHGR9, Portail Data INRAE, V3, UNF:6:CVoLl0fa9rXcSn5u2yGRmQ== [fileUNF]

1D 1H-NMR metabolomic profiling of 8 fleshy fruit species, including three herbaceous species, eggplant, pepper and cucumber, three tree species, apple, peach and clementine, and two vines, kiwifruit and grape. “stage-mixture sample”, dedicated to the identification of major solu...

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