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Type: (datasets) Subject: Plant Breeding and Plant Products Type: (datasets) Publication Year: 2020

1 to 10 of 56 Results

Amaizing Dent Panel Genotyping Dataset (354 Public Lines) Jan 10, 2020 - ThaliaDB maize Dataverse Nicolas, Stephane; Negro, Sandra; Madur, Delphine; Clipet, Camille; Combes, Valérie; Bauland, Cyril; Tardieu, François; Charcosset, Alain; Moreau, Laurence, 2020, "Amaizing Dent Panel Genotyping Dataset (354 Public Lines)", https://doi.org/10.15454/GAHEU0, Portail Data INRAE, V1, UNF:6:xDkI2MetKCmc6/d1u04ZkA== [fileUNF] Genotyping matrix of a collection of 354 dent maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 dent inbred lines from "Drops panel" assembled in the frame of F7P European projects DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 de...
Flowering-related traits and florigen expression in a collection of maize inbred lines Jan 13, 2020 - URGI Plant and Fungi Dataverse Castelletti, Sara* (equal contribution); Coupel-Ledru, Aude* (equal contribution); Correia-Granato, Italo; Palaffre, Carine; Cabrera-Bosquet, Llorenç; Tonelli, Chiara; Nicolas, Stéphane; Tardieu, François; Welcker, Claude; Conti, Lucio, 2020, "Flowering-related traits and florigen expression in a collection of maize inbred lines", https://doi.org/10.15454/XTHN7I, Portail Data INRAE, V1, UNF:6:wVg54W5AlhQ3d8cmAt/XoQ== [fileUNF] This dataset comes from a collection of 354 maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 inbred lines from "Drops panel" assembled in the frame of F7P European project DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 dent lines...
Data for: Economical optimization of a breeding scheme by selective phenotyping of the calibration set in a multi-trait context: application to bread making quality Jan 14, 2020 Ben Sadoun, Sarah; Rincent, Renaud; Auzanneau, Jerome; Oury, François-Xavier; Rolland, Bernard; Heumez, Emmanuel; Ravel, Catherine; Charmet, Gilles; Bouchet, Sophie, 2020, "Data for: Economical optimization of a breeding scheme by selective phenotyping of the calibration set in a multi-trait context: application to bread making quality", https://doi.org/10.15454/AABGO7, Portail Data INRAE, V2 This dataset supports the study of Bensadoun et al. about multi-trait genomic prediction of bread making quality. It includes genotypes and phenotypes of the winter wheat lines.
Multiple Correspondance Analysis of annotated data about Multi Criteria Assessment Methods used in the agri-food research Jan 28, 2020 - Multi Criteria Assessment Methods Sabbadin, Régis, 2020, "Multiple Correspondance Analysis of annotated data about Multi Criteria Assessment Methods used in the agri-food research", https://doi.org/10.15454/5ZTATS, Portail Data INRAE, V1 The annotation of scientific papers has been done in three steps described in detail in a related data paper (Gésan-Guiziou et al. 2019a). Firstly, the set of papers published by INRAE researchers from 2007 to 2017 have been extracted from the Web of Science (WOS) using a set of...
PaSim Feb 3, 2020 - UREP Martin, Raphael, 2020, "PaSim", https://doi.org/10.15454/WY0LJL, Portail Data INRAE, V1 This dataset contains the files necessary to use PaSim, namely the software and its user guide. IDDN: IDDN.FR.001.220024.000.R.P.2012.000.10000
http://grapevine-downy-mildew-genome.com/ Feb 7, 2020 - Grapevine Downy Mildew Genomics Dataverse Couture, Carole, 2020, "http://grapevine-downy-mildew-genome.com/", https://doi.org/10.15454/U1VH0Z, Portail Data INRAE, V1 website about grapevine downy mildew genome
FlintDent GWAS dataset Feb 7, 2020 - ThaliaDB maize Dataverse Rio Simon, 2020, "FlintDent GWAS dataset", https://doi.org/10.15454/OQT5CY, Portail Data INRAE, V1 This dataset corresponds to the data associated with the study: "Disentangling group specific QTL allele effects from genetic background epistasis in GWAS: an application to maize flowering" by Rio et al. (2019). The data includes genotypic and phenotypic information for a panel...
Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators Feb 10, 2020 - URGI Plant and Fungi Dataverse Guillaumie, Sabine; Decroocq, Stéphane; Ollat, Nathalie; Delrot, Serge; Gomès, Eric; Cookson, Sarah, 2020, "Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators", https://doi.org/10.15454/4ZUPCP, Portail Data INRAE, V1 A F2 population consisting of 337 individuals was derived from the inter-specific cross of V. vinifera cv. Cabernet-Sauvignon (CS) x V. riparia cv. Riparia Gloire de Montpellier (RGM). This population, named CS x RGM_F2, resulted from the self-fertilization of the F1_148 individu...
Enabling reusability of plant phenomic datasets with MIAPPE 1.1 - Supplementary dataset INRA Wheat Feb 28, 2020 - URGI Plant and Fungi Dataverse Oury, François-Xavier; Pommier, Cyril; Charmet, Gilles, 2020, "Enabling reusability of plant phenomic datasets with MIAPPE 1.1 - Supplementary dataset INRA Wheat", https://doi.org/10.15454/1AFKZ2, Portail Data INRAE, V1 This is a subset of the dataset "Winter wheat (Triticum aestivum L) phenotypic data from the multiannual, multilocal field trials of the INRA Small Grain Cereals Network." (doi:10.15454/1.4489666216568333E12). It is an ISA-Tab archive for the INRA wheat dataset, accompanying the...
Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset Feb 28, 2020 - URGI Plant and Fungi Dataverse Michotey, Célia, 2020, "Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset", https://doi.org/10.15454/EASUQV, Portail Data INRAE, V1 Data sets in different formats for the related paper "Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp", doi: 10.1186/1471-2229-12-173 Spreadsheet: GNPIS_poplar_spreadsheet.xlsx ISA-T...

Amaizing Dent Panel Genotyping Dataset (354 Public Lines)

Jan 10, 2020 - ThaliaDB maize Dataverse

Nicolas, Stephane; Negro, Sandra; Madur, Delphine; Clipet, Camille; Combes, Valérie; Bauland, Cyril; Tardieu, François; Charcosset, Alain; Moreau, Laurence, 2020, "Amaizing Dent Panel Genotyping Dataset (354 Public Lines)", https://doi.org/10.15454/GAHEU0, Portail Data INRAE, V1, UNF:6:xDkI2MetKCmc6/d1u04ZkA== [fileUNF]

Genotyping matrix of a collection of 354 dent maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 dent inbred lines from "Drops panel" assembled in the frame of F7P European projects DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 de...

Flowering-related traits and florigen expression in a collection of maize inbred lines

Jan 13, 2020 - URGI Plant and Fungi Dataverse

Castelletti, Sara* (equal contribution); Coupel-Ledru, Aude* (equal contribution); Correia-Granato, Italo; Palaffre, Carine; Cabrera-Bosquet, Llorenç; Tonelli, Chiara; Nicolas, Stéphane; Tardieu, François; Welcker, Claude; Conti, Lucio, 2020, "Flowering-related traits and florigen expression in a collection of maize inbred lines", https://doi.org/10.15454/XTHN7I, Portail Data INRAE, V1, UNF:6:wVg54W5AlhQ3d8cmAt/XoQ== [fileUNF]

This dataset comes from a collection of 354 maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 inbred lines from "Drops panel" assembled in the frame of F7P European project DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 dent lines...

Data for: Economical optimization of a breeding scheme by selective phenotyping of the calibration set in a multi-trait context: application to bread making quality

Jan 14, 2020

Ben Sadoun, Sarah; Rincent, Renaud; Auzanneau, Jerome; Oury, François-Xavier; Rolland, Bernard; Heumez, Emmanuel; Ravel, Catherine; Charmet, Gilles; Bouchet, Sophie, 2020, "Data for: Economical optimization of a breeding scheme by selective phenotyping of the calibration set in a multi-trait context: application to bread making quality", https://doi.org/10.15454/AABGO7, Portail Data INRAE, V2

This dataset supports the study of Bensadoun et al. about multi-trait genomic prediction of bread making quality. It includes genotypes and phenotypes of the winter wheat lines.

Multiple Correspondance Analysis of annotated data about Multi Criteria Assessment Methods used in the agri-food research

Jan 28, 2020 - Multi Criteria Assessment Methods

Sabbadin, Régis, 2020, "Multiple Correspondance Analysis of annotated data about Multi Criteria Assessment Methods used in the agri-food research", https://doi.org/10.15454/5ZTATS, Portail Data INRAE, V1

The annotation of scientific papers has been done in three steps described in detail in a related data paper (Gésan-Guiziou et al. 2019a). Firstly, the set of papers published by INRAE researchers from 2007 to 2017 have been extracted from the Web of Science (WOS) using a set of...

PaSim

Feb 3, 2020 - UREP

Martin, Raphael, 2020, "PaSim", https://doi.org/10.15454/WY0LJL, Portail Data INRAE, V1

This dataset contains the files necessary to use PaSim, namely the software and its user guide. IDDN: IDDN.FR.001.220024.000.R.P.2012.000.10000

http://grapevine-downy-mildew-genome.com/

Feb 7, 2020 - Grapevine Downy Mildew Genomics Dataverse

Couture, Carole, 2020, "http://grapevine-downy-mildew-genome.com/", https://doi.org/10.15454/U1VH0Z, Portail Data INRAE, V1

website about grapevine downy mildew genome

FlintDent GWAS dataset

Feb 7, 2020 - ThaliaDB maize Dataverse

Rio Simon, 2020, "FlintDent GWAS dataset", https://doi.org/10.15454/OQT5CY, Portail Data INRAE, V1

This dataset corresponds to the data associated with the study: "Disentangling group specific QTL allele effects from genetic background epistasis in GWAS: an application to maize flowering" by Rio et al. (2019). The data includes genotypic and phenotypic information for a panel...

Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators

Feb 10, 2020 - URGI Plant and Fungi Dataverse

Guillaumie, Sabine; Decroocq, Stéphane; Ollat, Nathalie; Delrot, Serge; Gomès, Eric; Cookson, Sarah, 2020, "Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators", https://doi.org/10.15454/4ZUPCP, Portail Data INRAE, V1

A F2 population consisting of 337 individuals was derived from the inter-specific cross of V. vinifera cv. Cabernet-Sauvignon (CS) x V. riparia cv. Riparia Gloire de Montpellier (RGM). This population, named CS x RGM_F2, resulted from the self-fertilization of the F1_148 individu...

Enabling reusability of plant phenomic datasets with MIAPPE 1.1 - Supplementary dataset INRA Wheat

Feb 28, 2020 - URGI Plant and Fungi Dataverse

Oury, François-Xavier; Pommier, Cyril; Charmet, Gilles, 2020, "Enabling reusability of plant phenomic datasets with MIAPPE 1.1 - Supplementary dataset INRA Wheat", https://doi.org/10.15454/1AFKZ2, Portail Data INRAE, V1

This is a subset of the dataset "Winter wheat (Triticum aestivum L) phenotypic data from the multiannual, multilocal field trials of the INRA Small Grain Cereals Network." (doi:10.15454/1.4489666216568333E12). It is an ISA-Tab archive for the INRA wheat dataset, accompanying the...

Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset

Feb 28, 2020 - URGI Plant and Fungi Dataverse

Michotey, Célia, 2020, "Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp - Supplementary dataset", https://doi.org/10.15454/EASUQV, Portail Data INRAE, V1

Data sets in different formats for the related paper "Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp", doi: 10.1186/1471-2229-12-173 Spreadsheet: GNPIS_poplar_spreadsheet.xlsx ISA-T...

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