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21 to 30 of 41 Results
Jun 11, 2020 - Transposons mobility in M. incognita
Kozlowski, Djampa; Da Rocha, Martine; Danchin, Eienne, 2020, "TE-related genes: annotation, characterisation, and expression.", https://doi.org/10.15454/DLDJVF, Portail Data INRAE, V1, UNF:6:0p5duAh0cUT41dCDh04q9g== [fileUNF]
Summary: contains the gene analysis workflow used to evaluate the genes expression and to find the genes potentially involved in the TEs transposition machinery. Also, it contains the gene annotation file (bed format), the proteome stem from (https://doi.org/10.1371/journal.pgen....
May 15, 2020 - Experimental - Observation - Simulation Dataverse
Chabert, Ariane; Marchand, Damien; Sarthou, Jean-Pierre, 2019, "Data from extensive comparative measurements of conventional, conservation and organic agricultures in Southwestern France", https://doi.org/10.15454/KEW1GK, Portail Data INRAE, V4, UNF:6:p5Dluu6TBsiRLpQiObqmOw== [fileUNF]
Observational and experimental data of crop pests, crop pest natural enemies, soil sensitivity to erosion, crop productivity, pathogenic fungal infection and root colonization by mycorrhiza in conventional, conservation and organic agricultures near Toulouse, France.
May 14, 2020 - Experimental - Observation - Simulation Dataverse
Laurent, Benoit, 2020, "Microhaplotype genotyping-by-sequencing of 98 highly polymorphic markers in three chestnut tree species", https://doi.org/10.15454/PNBEAM, Portail Data INRAE, V5, UNF:6:vfR+Xz1fRgxgxhqS02yR2g== [fileUNF]
Chestnut species have large ecological, cultural and economic importance. Developing genetic markers for these species is of interest for conservation, breeding or evolutionary studies. We designed 192 primer pairs targeting microsatellites detected in the Castanea mollissima ref...
May 5, 2020
Montarry, Josselin, 2020, "Hatching-data_Gautier-et-al_FIM", https://doi.org/10.15454/THNCAC, Portail Data INRAE, V1, UNF:6:Qx5HAPMFz/q1+QdYIuPKWA== [fileUNF]
Hatching rates of Globodera pallida in native and recolonized soils (A, D, F and J) for each replicate in each modality (dose 1, dose 2 and control).
Apr 1, 2020 - Experimental - Observation - Simulation Dataverse
Laurent, Benoit, 2020, "A richer community of Botryosphaeriaceae within a less diverse community of fungal endophytes in grapevines than in adjacent forest trees revealed by a mixed metabarcoding strategy.", https://doi.org/10.15454/JEOT4O, Portail Data INRAE, V1, UNF:6:iSW/6jVVjeRvjMhu7p/7iw== [fileUNF]
Botryosphaeriaceae are a diverse group of endophytic fungi colonizing the inner tissue of many woody species. As opportunist pathogens, they have been increasingly involved in diebacks worldwide. Nonetheless, the diversity of Botryosphaeriaceae, especially in asymptomatic plants,...
Mar 19, 2020
Montarry, Josselin, 2020, "RawData Gautier-et-al EcolEvol", https://doi.org/10.15454/H1PJ5Q, Portail Data INRAE, V1, UNF:6:oPZU1FfqWPSNOYf2VvFkGg== [fileUNF]
Hatching percentage of each pair of nematode/potato (each line is a replicate)
Feb 18, 2020 - Omics Dataverse
Vacher, Corinne, 2020, "R scripts used to infer microbial networks from metabarcoding data and validate them using text-mining", https://doi.org/10.15454/5WD6P6, Portail Data INRAE, V1, UNF:6:LNjhKptvEnA9T2eqRWfBNQ== [fileUNF]
R scripts and datafiles used to infer microbial association networks from metabarcoding data of grapevine foliar samples infected or not by powdery mildew (Erysiphe necator). R script used to search for microbial associations in the Scopus database.
Feb 18, 2020 - Omics Dataverse
Vacher, Corinne, 2020, "DNA metabarcoding of foliar fungal communities in an untreated vineyard", https://doi.org/10.15454/A24N4C, Portail Data INRAE, V1
This sequence dataset (FASTQ format) was obtained by metabarcoding fungal communities of 20-days old leaves in an untreated vineyard located in INRA Vilenave d'Ornon (France). The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pai...
Feb 10, 2020 - Biogeco Dataverse
Ehrenmann, Francois; Kremer, Antoine; Truffaut, Laura, 2020, "TREEPEACE project website", https://doi.org/10.15454/LU5QHT, Portail Data INRAE, V1
TREEPEACE project website There are widespread concerns that trees, due to their long life-span, are not able to cope with the rapid ongoing climate change. While many studies have so far investigated potential impacts of climate change on forests, much less attention has been gi...
Nov 21, 2019 - Experimental - Observation - Simulation Dataverse
Fabre, Frederic; Coville, Jérome; Cunniffe, Nik, 2019, "Optimising reactive disease management using spatially explicit models at the landscape scale", https://doi.org/10.15454/JWONRG, Portail Data INRAE, V3
R code associated with the book chapter "Optimising reactive disease management using spatially explicit models at the landscape scale". The R code describes a simple landscape-scale epidemic model to illustrate how dispersal and model structure can affect epidemic dynamics, as w...
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