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1 to 10 of 119 Results
Jan 22, 2021 - Omics Dataverse
Rué, Olivier, 2021, "Test dataset for assessment FROGS 16S amplicon methodology", https://doi.org/10.15454/VGVCIJ, Portail Data INRAE, V1
Grinder (v.0.5.3) (Angly, et al., 2012) was used to simulate the PCR amplification of fulllength (V3V4 and V4) sequences from reference databases. We generated 25 sets of species manually extracted from UTAX (Simulated Data From UTAX = SDFU) and 25 others from SILVA (v123) databa...
Jan 21, 2021 - Omics Dataverse
Rué, Olivier, 2021, "Test dataset for assessment FROGS ITS methodology", https://doi.org/10.15454/AOT7UL, Portail Data INRAE, V1
Our objective was to create datasets allowing, among other things, to test methods and tools to process data from Fungi metabarcoding sequencing. Consequently, we have computer-generated reads of 250 nucleotides in length from artificial PCRs produced with the Grinder software on...
Jan 15, 2021
Chonova, Teofana; Keck, Francois; Bouchez, Agnès; Rimet, Frederic, 2020, "A ready-to-use database for DADA2: Diat.barcode_rbcL_263bp_DADA2 based on Diat.barcode v9", https://doi.org/10.15454/QBLSXP, Portail Data INRAE, V2
This database is an adaptation for DADA2 of Diat.barcode v9. Length of sequences is 263 bp ------------------------- Rimet, Frederic; Chonova, Teofana; Gassiole, Gilles; Gusev, Evgenuy; Kahlert, Maria; Keck, François; Kelly, Martyn; Kulikovskiy, Maxim; Maltsev, Yevhen; Mann, Davi...
Jan 8, 2021 - Metabolomic responses of maize leaf to progressive controlled chilling
Urrutia, Maria; Bernillon, Stéphane; Moing, Annick, 2020, "LC-MS metabolomic analyses of maize young leaf cultivated in a growth chamber", https://doi.org/10.15454/J9KO72, Portail Data INRAE, V2, UNF:6:HTEu5gdg6G3uO2MDAMHGWQ== [fileUNF]
Analyses performed on 18 genetically-diverse hybrids using leaf methanolic extracts.
Jan 6, 2021
CANINO Alexis; LAPLACE-TREYTURE Christophe; BOUCHEZ Agnès; DOMAIZON Isabelle; RIMET Frédéric, 2021, "Données de réplication pour : PhytoDOM - Matériels Supplémentaires Rapport OFB 2020", https://doi.org/10.15454/W9JGOA, Portail Data INRAE, V1
Matériels Supplémentaires associés au rapport OFB 2020 pour le projet PhytoDOM Mat.Supp.1 : Liste DOM Mat.Supp.2 : Liste PHYTOBS homogénéisée AlgaeBase Mat.Supp.3 : Liste IPLAC Mat.Supp.4 : Taxonomie brute AlgaeBase Mat.Supp.5 : Listes ADN phytoplancton (.zip) Mat.Supp.6 : Protoc...
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphael-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Legumes submission file", https://doi.org/10.15454/J9RN5S, Portail Data INRAE, V1
Submission file of Legumes botanic family (16 proto-chromosomes) in PlantSyntenyViewer
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphael-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Brassicaea submission file", https://doi.org/10.15454/DKXVAC, Portail Data INRAE, V1
Submission file of Brassicaea botanic family (8 proto-chromosomes) in PlantSyntenyViewer
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphael-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Solanaceae submission file", https://doi.org/10.15454/TRBVMD, Portail Data INRAE, V1
Submission file of Solanaceae botanic family (17 proto-chromosomes) in PlantSyntenyViewer
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphael-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Rosaceae submission file", https://doi.org/10.15454/GUJBZB, Portail Data INRAE, V1
Submission file of Rosaceae botanic family (9 proto-chromosomes) in PlantSyntenyViewer
Jan 5, 2021 - URGI Plant and Fungi Dataverse
Flores, Raphaël-Gauthier; Salse, Jérôme; Huneau, Cécile, 2021, "PlantSyntenyViewer Cucurbitaceae submission file", https://doi.org/10.15454/A96TW6, Portail Data INRAE, V1, UNF:6:vlSesW7GRYcv9R3Ts6v1Ng== [fileUNF]
Submission file of Cucurbitaceae botanic family (22 proto-chromosomes) in PlantSyntenyViewer
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