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1 to 10 of 30 Results
Nov 5, 2019 - URGI Plant and Fungi Dataverse
Millet, Emilie J.; Pommier, Cyril; Buy, Mélanie; Nagel, Axel; Kruijer, Willem; Welz-Bolduan, Therese; Lopez, Jeremy; Richard, Cécile; Racz, Ferenc; Tanzi, Franco; Spitkot, Tamas; Canè, Maria-Angela; Negro, Sandra S.; Coupel-Ledru, Aude; Nicolas, Stéphane D.; Palaffre, Carine; Bauland, Cyril; Praud, Sébastien; Ranc, Nicolas; Presterl, Thomas; Bedo, Zoltan; Tuberosa, Roberto; Usadel, Björn; Charcosset, Alain; van Eeuwijk, Fred A.; Draye, Xavier; Tardieu, François; Welcker, Claude, 2019, "A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios",, Portail Data INRAE, V2, UNF:6:zF9w0A2f+MHeW7maeeXJWA== [fileUNF]
This dataset comes from the European Union project DROPS (DROught-tolerant yielding PlantS). A panel of 256 maize hybrids was grown with two water regimes (irrigated or rainfed), in seven fields in 2012 and 2013, respectively, spread along a climatic transect from western to east...
Jan 10, 2020 - ThaliaDB maize Dataverse
Nicolas, Stephane; Negro, Sandra; Madur, Delphine; Clipet, Camille; Combes, Valérie; Bauland, Cyril; Tardieu, François; Charcosset, Alain; Moreau, Laurence, 2020, "Amaizing Dent Panel Genotyping Dataset (354 Public Lines)",, Portail Data INRAE, V1, UNF:6:xDkI2MetKCmc6/d1u04ZkA== [fileUNF]
Genotyping matrix of a collection of 354 dent maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 dent inbred lines from "Drops panel" assembled in the frame of F7P European projects DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 de...
Mar 24, 2020 - Biogeco Dataverse
Dutech, Cyril; Feau, Nicolas; Lesur, Isabelle; Ehrenmann, François; Letellier, Thomas; Li, Bayo; Mouden, Charlotte; Guichoux, Erwan; Desprez-Loustau, Marie-Laure; Gross, Andrin, 2020, "An easy and robust method for isolation and validation of single nucleotide polymorphic markers from the Erysiphe alphitoides, the oak powdery mildew, draft genome",, Portail Data INRAE, V2
This dataset includes the sequence and SNP data, and the scripts for detecting SNP from targeted sequences isolated from the Erysipe alphitoides draft genome. The draft genome sequencing used the SRR10956459 short reads (Bioproject: PRJNA593204). Assembly and Annotation of the dr...
Mar 13, 2020 - AMAP ECOSFIX
Perez, Jerome, 2020, "Base de données ECOSFIX",, Portail Data INRAE, V1, UNF:6:hfvz7vdm0PpK4OfkD7R2Tw== [fileUNF]
Le Projet ECOSFIX vise à structurer, homogénéiser, gérer et analyser des données permettant de déterminer comment un type de forêt affecte les traits physiques et fonctionnels des racines.
Jun 28, 2019
Fort, Tania; Pauvert, Charlie; Zanne, Amy E.; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2019, "Bioinformatic and statistical scripts to analyze acorn mycobiota structure and composition",, Portail Data INRAE, V1, UNF:6:TFUhrxuDLdy+rmsmGam2Yg== [fileUNF]
This dataset contains R-scripts to perform bioinformatic and statistical analysis on acorn associated fungal communities (Fort et al., Maternal effects and environmental filtering shape seed fungal communities in oak trees. Submitted). Bioinformatic script was applied to raw sequ...
Jul 17, 2019
Ay, Jean-Sauveur, 2019, "Classification statistique des vignobles de Côte d'Or",, Portail Data INRAE, V3
Modélisation statistique des liens entre les attributs naturels des vignobles de Côte-d'Or et la hiérarchie des appellations d'origine contrôlée afin d'estimer un score de qualité pour chaque parcelle et de corriger les effets historiques à l'échelle communale. sur github @ https...
Oct 16, 2018 - BioForA Dataverse
Rogier, Odile; Chateigner, Aurélien; Amanzougarene, Souhila; Lesage-Descauses, Marie-Claude; Balzergue, Sandrine; Brunaud, Véronique; Caius, José; Soubigou-Taconnat, Ludivine; Jorge, Véronique; Segura, Vincent, 2018, "Data from: Accuracy of RNAseq based SNP discovery and genotyping in Populus nigra",, Portail Data INRAE, V1
This dataset includes analysis files for the paper "Accuracy of RNAseq based SNP discovery and genotyping in Populus nigra"
Oct 14, 2020 - Biogeco Dataverse
Danjon, Frédéric; Saint Cast, Clément; Meredieu, Céline; Bert, Didier; Danquechin Dorval, Antoine; Issenhuth, Bernard; Lagane, Frédéric; Ségura, Raphaël, 2020, "Descriptive variables of 11,004 roots from 69 Pinus pinaster root systems excavated and digitized in 3D",, Portail Data INRAE, V1, UNF:6:FL0LCMy3RvT1EXOu6emvZg== [fileUNF]
This data set include 11004 roots from 69 coarse root systems of Pinus pinaster trees. These trees belong from the same local provenance of P. pinaster trees germinated in the field and grown in the same area (forest range of the “Landes de Gascogne” in Southwest France).These tr...
Feb 10, 2020 - URGI Plant and Fungi Dataverse
Guillaumie, Sabine; Decroocq, Stéphane; Ollat, Nathalie; Delrot, Serge; Gomès, Eric; Cookson, Sarah, 2020, "Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators",, Portail Data INRAE, V1
A F2 population consisting of 337 individuals was derived from the inter-specific cross of V. vinifera cv. Cabernet-Sauvignon (CS) x V. riparia cv. Riparia Gloire de Montpellier (RGM). This population, named CS x RGM_F2, resulted from the self-fertilization of the F1_148 individu...
Jun 17, 2019 - ThaliaDB maize Dataverse
Nicolas, Stéphane; Madur, Delphine; Negro, Sandra; Combes, Valérie; Bauland, Cyril; Tardieu, François; Millet, Emilie; Welcker, Claude; Charcosset, Alain, 2019, "DROPS maize genotyping elaborate dataset",, Portail Data INRAE, V1
These three dataset correspond to three elaborate genotyping matrix after filtering and imputation published by Negro et al., (2019) in BMC Plant Biology: "Genotyping-by-sequencing and SNP arrays are complementary for detecting quantitative trait loci by tagging different haploty...
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