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31 to 40 of 53 Results
Apr 1, 2020 - Experimental - Observation - Simulation Dataverse
Laurent, Benoit, 2020, "A richer community of Botryosphaeriaceae within a less diverse community of fungal endophytes in grapevines than in adjacent forest trees revealed by a mixed metabarcoding strategy.", https://doi.org/10.15454/JEOT4O, Portail Data INRAE, V1, UNF:6:iSW/6jVVjeRvjMhu7p/7iw== [fileUNF]
Botryosphaeriaceae are a diverse group of endophytic fungi colonizing the inner tissue of many woody species. As opportunist pathogens, they have been increasingly involved in diebacks worldwide. Nonetheless, the diversity of Botryosphaeriaceae, especially in asymptomatic plants,...
Mar 19, 2020
Montarry, Josselin, 2020, "RawData Gautier-et-al EcolEvol", https://doi.org/10.15454/H1PJ5Q, Portail Data INRAE, V1, UNF:6:oPZU1FfqWPSNOYf2VvFkGg== [fileUNF]
Hatching percentage of each pair of nematode/potato (each line is a replicate)
Feb 18, 2020 - Omics Dataverse
Vacher, Corinne, 2020, "R scripts used to infer microbial networks from metabarcoding data and validate them using text-mining", https://doi.org/10.15454/5WD6P6, Portail Data INRAE, V1, UNF:6:LNjhKptvEnA9T2eqRWfBNQ== [fileUNF]
R scripts and datafiles used to infer microbial association networks from metabarcoding data of grapevine foliar samples infected or not by powdery mildew (Erysiphe necator). R script used to search for microbial associations in the Scopus database.
Feb 18, 2020 - Omics Dataverse
Vacher, Corinne, 2020, "DNA metabarcoding of foliar fungal communities in an untreated vineyard", https://doi.org/10.15454/A24N4C, Portail Data INRAE, V1
This sequence dataset (FASTQ format) was obtained by metabarcoding fungal communities of 20-days old leaves in an untreated vineyard located in INRA Vilenave d'Ornon (France). The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pai...
Feb 10, 2020 - Biogeco Dataverse
Ehrenmann, Francois; Kremer, Antoine; Truffaut, Laura, 2020, "TREEPEACE project website", https://doi.org/10.15454/LU5QHT, Portail Data INRAE, V1
TREEPEACE project website There are widespread concerns that trees, due to their long life-span, are not able to cope with the rapid ongoing climate change. While many studies have so far investigated potential impacts of climate change on forests, much less attention has been gi...
Nov 21, 2019 - Experimental - Observation - Simulation Dataverse
Fabre, Frederic; Coville, Jérome; Cunniffe, Nik, 2019, "Optimising reactive disease management using spatially explicit models at the landscape scale", https://doi.org/10.15454/JWONRG, Portail Data INRAE, V3
R code associated with the book chapter "Optimising reactive disease management using spatially explicit models at the landscape scale". The R code describes a simple landscape-scale epidemic model to illustrate how dispersal and model structure can affect epidemic dynamics, as w...
Nov 7, 2019
BARANGER, Alain; PILET-NAYEL, Marie-Laure; MILLOT, Dominique; CABANAC, Guillaume, 2019, "Biotic Stress and Grain-Legumes WoS DataSet 1980-2018", https://doi.org/10.15454/L79X2K, Portail Data INRAE, V2, UNF:6:aCFR2KU+VILUcbgyI9eesw== [fileUNF]
The text file corresponds to the search query capturing the main biotic stress research theme on grain-legumes (both soya and pulses, see Species Grain-Legumes WoS dataset) to be applied on the WoS (Web of Knowledge). This search query is restricted to the main types of scientifi...
Nov 5, 2019
VOISIN, Anne-Sophie; JOURNET, Etienne-Pascal; LEISER, Hugues; CABANAC, Guillaume, 2019, "Ecophysiology and Grain-Legumes WoS DataSet 1980-2018", https://doi.org/10.15454/F0CNNS, Portail Data INRAE, V1, UNF:6:IMRDDP4bNCY3/dwDTQpwNA== [fileUNF]
The text file corresponds to the search query capturing the main ecophysiology research theme on grain-legumes (both soya and pulses, see Species Grain-Legumes WoS dataset) to be applied on the WoS (Web of Knowledge). This search query is restricted to the main types of scientifi...
Jul 30, 2019 - Omics Dataverse
Pauvert, Charlie; Vallance, Jessica; Delière, Laurent; Buée, Marc; Vacher, Corinne, 2019, "Amplicon Sequence Variant (ASV) table obtained by metabarcoding foliar fungal communities in conventional and organic vineyards", https://doi.org/10.15454/WOICSE, Portail Data INRAE, V1, UNF:6:PSwFBpb4Vxgr5rwUlkcPUQ== [fileUNF]
This Amplicon Sequence Variant (ASV) table was obtained by metabarcoding foliar fungal communities in conventional and organic vineyards. This table was generated after the application of the bioinformatics scripts (at https://doi.org/10.15454/NSHUAQ) to the sequences available a...
Jul 12, 2019
Ma, Yuxin; Marais-Colombel, Armelle; Lefebvre, Marie; Svanella-Dumas, Laurence; Faure, Chantal; Candresse, Thierry, 2019, "Viral metagenomic data for comparison of two viral sequence enrichment approaches", https://doi.org/10.15454/TVWBCQ, Portail Data INRAE, V1
This study aims at comparing the performance of two viral sequence enrichment approaches, double-stranded RNA (dsRNA) and Virion-associated nucleic acids (VANA) purification for the description of the viromes in various complex plant pools. In total 12 libraries were prepared for...
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