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41 to 50 of 53 Results
May 9, 2019 - Omics Dataverse
Pauvert, Charlie; Vallance, Jessica; Delière, Laurent; Buée, Marc; Vacher, Corinne, 2019, "Bioinformatic scripts to assess the effect of the cropping system on both community and network α- and β-properties of fungal microbiota", https://doi.org/10.15454/NSHUAQ, Portail Data INRAE, V1
These bioinformatics scripts were applied to the sequences available at https://doi.org/10.15454/3DPFNJ. They are based on several softwares, including SparCC (Friedman and Alm 2012) and DADA2 (Callahan et al. 2016). The code corresponds to R and R markdown files. These scripts w...
May 7, 2019 - Omics Dataverse
Pauvert, Charlie; Vallance, Jessica; Delière, Laurent; Buée, Marc; Vacher, Corinne, 2019, "DNA metabarcoding of foliar fungal communities in conventional and organic vineyards", https://doi.org/10.15454/3DPFNJ, Portail Data INRAE, V1
This sequence dataset (FASTQ format) was obtained by metabarcoding foliar fungal communities in conventional and organic vineyards. The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pair and sequenced on an Illumina MiSeq platfor...
Mar 8, 2019 - Multi Criteria Assessment Methods
Gésan-Guiziou, Geneviève; Alaphilippe, Aude; Andro, Mathieu; Aubin, Joël; Bockstaller, Christian; Botreau, Raphaëlle; Buche, Patrice; Collet, Catherine; Darmon, Nicole; Delabuis, Monique; Girard, Agnès; Grateau, Régis; Kansou, Kamal; Martinet, Vincent; Membré, Jeanne-Marie; Sabbadin, Régis; Soler, Louis-Georges; Thiollet-Scholtus, Marie; Tonda, Alberto; Van-Der-Werf, Hayo, 2019, "Annotation data about Multi Criteria Assessment Methods used in the agri-food research : the French National Institute for Agricultural Research (INRA) experience", https://doi.org/10.15454/WB51LL, Portail Data INRAE, V2, UNF:6:gfLdB4WVXzg8A986MUUPFA== [fileUNF]
This data article contains annotation data characterizing Multi Criteria Assessment Methods proposed in the scientific literature by INRA researchers.
Dec 3, 2018 - Experimental - Observation - Simulation Dataverse
Fournet, Sylvain; Pellan, Lucille; Porte, Catherine; Piriou, Christophe; Grenier, Eric; Montarry, Josselin, 2018, "Replication Data for: Populations of the Beet Cyst Nematode Heterodera schachtii Exhibit Strong Differences in their Life-History Traits Across Changing Thermal Conditions", https://doi.org/10.15454/ZKGTAH, Portail Data INRAE, V1, UNF:6:kGELlMGJlDIZ67eLVrEq/g== [fileUNF]
It is widely accepted that climate has an essential influence on the distribution of species and that temperature is the major abiotic factor that affects their life-history traits. Species with very restricted active dispersal abilities and a wide geographical distribution are t...
Dec 3, 2018 - Experimental - Observation - Simulation Dataverse
Mariette, Nicolas; Kröner, Alexander; Mabon, Romain; Montarry, Josselin; Marquer, Bruno; Corbière, Roselyne; Androdias, Annabelle; Andrivon, Didier, 2018, "Sporangia size and number relationship for Phytophthora infestans isolates", https://doi.org/10.15454/BB0WJN, Portail Data INRAE, V1, UNF:6:n2M9Z7zG1mjhlXER7RDCWQ== [fileUNF]
Phenotypic data (sporangia size and sporangia number) of P. infestans isolates obtained in three infection experiments conducted under controlled conditions.
Aug 3, 2018 - Omics Dataverse
Pauvert, Charlie; Buée, Marc; Laval, Valérie; Edel-Hermann, Véronique; Fauchery, Laure; Gautier, Angélique; Lesur Kupin, Isabelle; Vallance, Jessica; Vacher, Corinne, 2018, "DNA metabarcoding of a mock community of 189 fungal strains associated to plants and soils.", https://doi.org/10.15454/8CVWRR, Portail Data INRAE, V1
This sequence dataset (FASTQ format) was obtained by metabarcoding an artificial (mock) fungal community. The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pair and sequenced on an Illumina MiSeq platform (v3 chemistry, 2x250 bp)...
Jul 18, 2018 - Experimental - Observation - Simulation Dataverse
Muneret, Lucile; Mitchell Matthew; Seufert, Verena; Aviron, Stéphanie; Djoudi, El Aziz; Pétillon, Julien; Plantegenest, Manuel; Thiéry, Denis; Rusch, Adrien, 2018, "Evidence that organic farming promotes pest control", https://doi.org/10.15454/DV8LMF, Portail Data INRAE, V1
Data sets used to examine the effect of organic farming on pest control potential and pest infestation levels in agrosystems. The article has been published in July 2018 in Nature Sustainability.
Biogeco Dataverse(INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement - www.inrae.fr)
Biogeco Dataverse logo
May 18, 2018Experimental - Observation - Simulation Dataverse
BIOGECO (BIOdiversité, GEnes & COmmunautés) est une Unité Mixte de Recherche (UMR) de l’INRAE et de l’université de Bordeaux. L’unité comprend des spécialistes de l’écologie, de la génétique des populations, quantitative et évolutive. Les activités de recherche menées par BIOGECO...
Jan 18, 2018
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