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Subject: Genetic Resource Publication Year: 2020

11 to 20 of 32 Results

Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array Dec 8, 2020 - ThaliaDB maize Dataverse Nicolas, Stéphane; Madur, Delphine; Charcosset, Alain; Bauland, Cyril; Combes, Valérie; Berard, Aurélie; Arca, Mariangela; Mary-Huard, Tristan; Le Paslier, Marie-Christine; Gouesnard, Brigitte, 2020, "Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array", https://doi.org/10.15454/GANJ7J, Portail Data INRAE, V1, UNF:6:IvZiMGs4Oo8oWZqgBbcDdA== [fileUNF] R scripts and fluorescence intensity datasets of 24 controlled pools and 327 inbred lines panels extracted from 50K Illumina Infinium HD array (Ganal et al., 2010). These datasets and R scripts can be used to calibrate a model to predict allelic frequencies in new DNA bulks using...
Fourrages ligneux(INRAE) Jun 23, 2020Experimental - Observation - Simulation Dataverse Ce dataverse a pour vocation de rassembler les résultats des travaux réalisés sur les fourrages ligneux (arbres, arbustes ou lianes fourragères), qu’ils concernent leur valeur nutritive, la quantité de biomasse produite ou ingérée ou bien le comportement des animaux. This dataver...
Fruit tree phenology(INRAE - Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement) Jun 17, 2020Unité Expérimentale Horticole This Dataverse is composed both of phenological data of 5 species of fruit trees (apple, pear, cherry, peach and apricot) present on the Horticulture Experimental Facility, as well as meteorological data.
Genetic diversity for seed germination in response to temperature and scarification / Diversité génétique pour la germination des graines de luzerne en réponse à la température et à la scarification Dec 30, 2020 Julier, Bernadette, 2020, "Genetic diversity for seed germination in response to temperature and scarification / Diversité génétique pour la germination des graines de luzerne en réponse à la température et à la scarification", https://doi.org/10.15454/YIECZS, Portail Data INRAE, V1, UNF:6:SaRyQd8LfUD4f7gDPMnhiw== [fileUNF] Lucerne (Medicago sativa), a major perennial pasture legume, belongs to a species complex that includes several subspecies with wild and cultivated populations. Stand establishment may be compromised by poor germination. Seed scarification and deterioration as well as temperature...
Growth data for 26 provenances of Quercus petraea and Q robur at three common gardens in France Apr 8, 2020 - Biogeco Dataverse Bert, Didier; Lebourgeois, François; Ponton, Stéphane; Musch, Brigitte; Ducousso, Alexis, 2020, "Growth data for 26 provenances of Quercus petraea and Q robur at three common gardens in France", https://doi.org/10.15454/PADEA1, Portail Data INRAE, V1, UNF:6:Ep3GgBi9KkZP2og4DL2brA== [fileUNF] The dataset is composed of 5 columns and 1140 lines: “Garden” is the code for the common garden: 1 is for “Petite Charnie” (western France), 2 for “Vincence” (center of France) and 3 for “Sillegny” (north-eastern France) “Code” is the code number of the oak provenance “Provenance...
IN-SYLVA-France Dataverse(www.inra.fr) Sep 30, 2020Experimental - Observation - Simulation Dataverse
Instructions for use SS4I Software Dec 1, 2020 - Select SNP for Imputation Herault, Frederic, 2020, "Instructions for use SS4I Software", https://doi.org/10.15454/PD5RDB, Portail Data INRAE, V1 Instructions for use SS4I Software
Long term monitoring of evolutionary changes in oak stands Dec 9, 2020 - Biogeco Dataverse Alexandre, Hermine; Truffaut, Laura; Klein, Etienne; Ducousso, Alexis; Chancerel, Emilie; Lesur, Isabelle; Dencausse, Benjamin; Louvet, Jean-Marc; Nepveu, Gérard; Torres-Ruiz, José M.; Lagane, Frédéric; Musch, Brigitte; Delzon, Sylvain; Kremer, Antoine, 2020, "Long term monitoring of evolutionary changes in oak stands", https://doi.org/10.15454/XL23BS, Portail Data INRAE, V1, UNF:6:9upGid54ouhcG7oBqApC8Q== [fileUNF] This dataset is composed of 4 files : The file EcologyG1&G2 provides ecological data assessed on the level of each tree (G1 and G2) and derived from a floristic survey. Details about the assessments of the ecological data are provided in Truffaut et al (2017, Article p. 127 and S...
Medicago truncatula flowering time data from: Evolution of flowering time in a selfing annual plant - Roles of adaptation and genetic drift Jan 19, 2021 Gay, Laurene, 2020, "Medicago truncatula flowering time data from: Evolution of flowering time in a selfing annual plant - Roles of adaptation and genetic drift", https://doi.org/10.15454/ZY83BE, Portail Data INRAE, V3, UNF:6:lq8IWDHWtTyKiDh07aSTRg== [fileUNF] Phenotypic and genetic dataset for a population of Medicago truncatula located in Cape Corsica (CO3), analysed in "Evolution of flowering time in a selfing annual plant: Roles of adaptation and genetic drift". The readme file summarizes the different datasets available.
MINTIA paper Biological samples May 29, 2020 Laguerre, Sandrine, 2020, "MINTIA paper Biological samples", https://doi.org/10.15454/AH8CRS, Portail Data INRAE, V1 Reads corresponding to the biological samples initially analysed in "Investigating Host Microbiota Relationships Through Functional Metagenomics" of Laville et al and used to validate MINTIA pipeline on biological samples. The assembled and annotated fosmids of Laville et al are...

Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array

Dec 8, 2020 - ThaliaDB maize Dataverse

Nicolas, Stéphane; Madur, Delphine; Charcosset, Alain; Bauland, Cyril; Combes, Valérie; Berard, Aurélie; Arca, Mariangela; Mary-Huard, Tristan; Le Paslier, Marie-Christine; Gouesnard, Brigitte, 2020, "Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array", https://doi.org/10.15454/GANJ7J, Portail Data INRAE, V1, UNF:6:IvZiMGs4Oo8oWZqgBbcDdA== [fileUNF]

R scripts and fluorescence intensity datasets of 24 controlled pools and 327 inbred lines panels extracted from 50K Illumina Infinium HD array (Ganal et al., 2010). These datasets and R scripts can be used to calibrate a model to predict allelic frequencies in new DNA bulks using...

Fourrages ligneux(INRAE)

Jun 23, 2020Experimental - Observation - Simulation Dataverse

Ce dataverse a pour vocation de rassembler les résultats des travaux réalisés sur les fourrages ligneux (arbres, arbustes ou lianes fourragères), qu’ils concernent leur valeur nutritive, la quantité de biomasse produite ou ingérée ou bien le comportement des animaux. This dataver...

Fruit tree phenology(INRAE - Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement)

Jun 17, 2020Unité Expérimentale Horticole

This Dataverse is composed both of phenological data of 5 species of fruit trees (apple, pear, cherry, peach and apricot) present on the Horticulture Experimental Facility, as well as meteorological data.

Genetic diversity for seed germination in response to temperature and scarification / Diversité génétique pour la germination des graines de luzerne en réponse à la température et à la scarification

Dec 30, 2020

Julier, Bernadette, 2020, "Genetic diversity for seed germination in response to temperature and scarification / Diversité génétique pour la germination des graines de luzerne en réponse à la température et à la scarification", https://doi.org/10.15454/YIECZS, Portail Data INRAE, V1, UNF:6:SaRyQd8LfUD4f7gDPMnhiw== [fileUNF]

Lucerne (Medicago sativa), a major perennial pasture legume, belongs to a species complex that includes several subspecies with wild and cultivated populations. Stand establishment may be compromised by poor germination. Seed scarification and deterioration as well as temperature...

Growth data for 26 provenances of Quercus petraea and Q robur at three common gardens in France

Apr 8, 2020 - Biogeco Dataverse

Bert, Didier; Lebourgeois, François; Ponton, Stéphane; Musch, Brigitte; Ducousso, Alexis, 2020, "Growth data for 26 provenances of Quercus petraea and Q robur at three common gardens in France", https://doi.org/10.15454/PADEA1, Portail Data INRAE, V1, UNF:6:Ep3GgBi9KkZP2og4DL2brA== [fileUNF]

The dataset is composed of 5 columns and 1140 lines: “Garden” is the code for the common garden: 1 is for “Petite Charnie” (western France), 2 for “Vincence” (center of France) and 3 for “Sillegny” (north-eastern France) “Code” is the code number of the oak provenance “Provenance...

IN-SYLVA-France Dataverse(www.inra.fr)

Sep 30, 2020Experimental - Observation - Simulation Dataverse

Instructions for use SS4I Software

Dec 1, 2020 - Select SNP for Imputation

Herault, Frederic, 2020, "Instructions for use SS4I Software", https://doi.org/10.15454/PD5RDB, Portail Data INRAE, V1

Instructions for use SS4I Software

Long term monitoring of evolutionary changes in oak stands

Dec 9, 2020 - Biogeco Dataverse

Alexandre, Hermine; Truffaut, Laura; Klein, Etienne; Ducousso, Alexis; Chancerel, Emilie; Lesur, Isabelle; Dencausse, Benjamin; Louvet, Jean-Marc; Nepveu, Gérard; Torres-Ruiz, José M.; Lagane, Frédéric; Musch, Brigitte; Delzon, Sylvain; Kremer, Antoine, 2020, "Long term monitoring of evolutionary changes in oak stands", https://doi.org/10.15454/XL23BS, Portail Data INRAE, V1, UNF:6:9upGid54ouhcG7oBqApC8Q== [fileUNF]

This dataset is composed of 4 files : The file EcologyG1&G2 provides ecological data assessed on the level of each tree (G1 and G2) and derived from a floristic survey. Details about the assessments of the ecological data are provided in Truffaut et al (2017, Article p. 127 and S...

Medicago truncatula flowering time data from: Evolution of flowering time in a selfing annual plant - Roles of adaptation and genetic drift

Jan 19, 2021

Gay, Laurene, 2020, "Medicago truncatula flowering time data from: Evolution of flowering time in a selfing annual plant - Roles of adaptation and genetic drift", https://doi.org/10.15454/ZY83BE, Portail Data INRAE, V3, UNF:6:lq8IWDHWtTyKiDh07aSTRg== [fileUNF]

Phenotypic and genetic dataset for a population of Medicago truncatula located in Cape Corsica (CO3), analysed in "Evolution of flowering time in a selfing annual plant: Roles of adaptation and genetic drift". The readme file summarizes the different datasets available.

MINTIA paper Biological samples

May 29, 2020

Laguerre, Sandrine, 2020, "MINTIA paper Biological samples", https://doi.org/10.15454/AH8CRS, Portail Data INRAE, V1

Reads corresponding to the biological samples initially analysed in "Investigating Host Microbiota Relationships Through Functional Metagenomics" of Laville et al and used to validate MINTIA pipeline on biological samples. The assembled and annotated fosmids of Laville et al are...

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