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Kind of Data: Software Author Name: Vacher, Corinne

1 to 3 of 3 Results

Bioinformatic and statistical scripts to analyze metabarcoding data of fungal communities Dec 7, 2020 - Omics Dataverse Fort, Tania; Pauvert, Charlie; Zanne, Amy; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2020, "Bioinformatic and statistical scripts to analyze metabarcoding data of fungal communities", https://doi.org/10.15454/0CNFWS, Portail Data INRAE, V3, UNF:6:+ROFl+GYxv+1vFHcrzj8MA== [fileUNF] This dataset contains R-scripts to analyse the diversity and composition of seed fungal communities (Fort et al., Maternal effects shape seed fungal communities in Quercus petraea. Submitted). The bioinformatic script was applied to raw sequences after paired-end sequences were j...
R scripts used to infer microbial networks from metabarcoding data and validate them using text-mining Feb 18, 2020 - Omics Dataverse Vacher, Corinne, 2020, "R scripts used to infer microbial networks from metabarcoding data and validate them using text-mining", https://doi.org/10.15454/5WD6P6, Portail Data INRAE, V1, UNF:6:LNjhKptvEnA9T2eqRWfBNQ== [fileUNF] R scripts and datafiles used to infer microbial association networks from metabarcoding data of grapevine foliar samples infected or not by powdery mildew (Erysiphe necator). R script used to search for microbial associations in the Scopus database.
Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves Feb 18, 2020 - Omics Dataverse Vacher, Corinne, 2020, "Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves", https://doi.org/10.15454/WLHBP6, Portail Data INRAE, V1, UNF:6:LYk3rj9ck7B/6LlcF6oIcQ== [fileUNF] Bioinformatic scripts used to sort, filter and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an untreated vineyard at INRA Villenave d'Ornon (France). Amplicon sequence variant (ASV) tables obtained for vine leaves a...

Bioinformatic and statistical scripts to analyze metabarcoding data of fungal communities

Dec 7, 2020 - Omics Dataverse

Fort, Tania; Pauvert, Charlie; Zanne, Amy; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2020, "Bioinformatic and statistical scripts to analyze metabarcoding data of fungal communities", https://doi.org/10.15454/0CNFWS, Portail Data INRAE, V3, UNF:6:+ROFl+GYxv+1vFHcrzj8MA== [fileUNF]

This dataset contains R-scripts to analyse the diversity and composition of seed fungal communities (Fort et al., Maternal effects shape seed fungal communities in Quercus petraea. Submitted). The bioinformatic script was applied to raw sequences after paired-end sequences were j...

R scripts used to infer microbial networks from metabarcoding data and validate them using text-mining

Feb 18, 2020 - Omics Dataverse

Vacher, Corinne, 2020, "R scripts used to infer microbial networks from metabarcoding data and validate them using text-mining", https://doi.org/10.15454/5WD6P6, Portail Data INRAE, V1, UNF:6:LNjhKptvEnA9T2eqRWfBNQ== [fileUNF]

R scripts and datafiles used to infer microbial association networks from metabarcoding data of grapevine foliar samples infected or not by powdery mildew (Erysiphe necator). R script used to search for microbial associations in the Scopus database.

Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves

Feb 18, 2020 - Omics Dataverse

Vacher, Corinne, 2020, "Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves", https://doi.org/10.15454/WLHBP6, Portail Data INRAE, V1, UNF:6:LYk3rj9ck7B/6LlcF6oIcQ== [fileUNF]

Bioinformatic scripts used to sort, filter and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an untreated vineyard at INRA Villenave d'Ornon (France). Amplicon sequence variant (ASV) tables obtained for vine leaves a...

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