Type: (dataverses OR datasets OR files) Subject: Biodiversity and Ecology Type: (dataverses OR datasets OR files) Author Name: Rimet, Frédéric
1 to 8 of 8 Results
Jul 12, 2018
Rimet, Frédéric; Chardon, Cécile; Lainé, Leslie; Bouchez, Agnès; Domaizon, Isabelle; Guillard, Jean; Jacquet, Stéphan, 2018, "Thonon Culture Collection -TCC- a freshwater microalgae collection", https://doi.org/10.15454/UQEMVW, Portail Data INRAE, V1
The main objectives of the TCC are to maintain cultures and uncultured samples of freshwater microalgae and to ensure their availability for : - Research projects (research scientists, PhD students). - Development projects (industrial companies). - Practical work in education. -... |
Lefrançois, Estelle; Blancher, Philippe; Rimet, Frédéric; Bouchez, Agnès, 2020, "Strategy for Successful Integration of eDNA-based Methods in Aquatic Monitoring", https://doi.org/10.15454/29LFIW, Portail Data INRAE, V2
Recent developments in the use of environmental DNA are opening up new horizons for the assessment of the quality of aquatic environments. These rapid and cost-effective methods make it possible to identify all the taxa present in an environmental sample (water or biota). The pro... |
Jul 19, 2018
Chaumeil, Philippe; Fischer-Le Saux, Marion; Frigerio, Jean-Marc; Grenier, Eric; Rimet, Frédéric; Streito, Jean-Claude; Laval, Valérie; Franc, Alain, 2018, "R-Syst: a network providing curated molecular databases and data analysis tools for taxonomy and systematics (Prokaryotes and Eucaryotes)", https://doi.org/10.15454/OEDAUS, Portail Data INRAE, V1
R-Syst network deals about systematic and (meta) barcoding and provide curated molecular databases for species identification and provide tools for diagnosis and inventories. The stakes are at the same time a precise diagnosis of organisms of interest (for example pathogens detec... |
Sep 25, 2019
Rimet, Frédéric; Tapolczai, Kalman; Vasselon, Valentin; Mary, Nathalie; Bouchez, Agnès, 2019, "Mayotte rivers: databases used for the development of diatom and macroinvertebrates water quality tools.", https://doi.org/10.15454/6Z5IAH, Portail Data INRAE, V1, UNF:6:ONruidDb0OPOqJ6sI38KPQ== [fileUNF]
Données ayant servi au projet "Développement d’outils de bio-indication «phytobenthos» et «macro-invertébrés benthiques» pour les eaux de surface continentales de Mayotte". Ce projet a été financé par l'AFB, Agence Française pour la Biodiversité Les correspondants AFB: Olivier MO... |
Feb 24, 2020
Rivera, Sinziana; Vasselon, Valentin; May, Nathalie; Monnier, Olivier; Rimet, Frédéric; Bouchez, Agnès, 2020, "Data supplementing the article “Exploring the capacity of aquatic biofilms to act as environmental DNA samplers: test on macroinvertebrate communities in rivers” - Macroinvertebrate reference library", https://doi.org/10.15454/UNUFWY, Portail Data INRAE, V1
These data supplement the article “Exploring the capacity of aquatic biofilms to act as environmental DNA samplers: test on macroinvertebrate communities in rivers” Sinziana F. Rivera, Valentin Vasselon, Nathalie Mary, Olivier Monnier, Fréderic Rimet & Agnès Bouchez submitted to... |
Feb 24, 2020
Rivera, Sinziana; Vasselon, Valentin; Mary, Nathalie; Monnier, Olivier; Rimet, Frédéric; Bouchez, Agnès, 2020, "Data supplementing the article “Aquatic biofilms as passive environmental DNA samplers: application to benthic macroinvertebrate communities in rivers” - raw MiSeq data, inventories", https://doi.org/10.15454/SXKA8I, Portail Data INRAE, V2, UNF:6:qkDWkBPhUOQHwccJmQL5Ng== [fileUNF]
These data supplement the article “Aquatic biofilms as passive environmental DNA samplers: application to benthic macroinvertebrate communities in rivers” Sinziana F. Rivera, Valentin Vasselon, Nathalie Mary, Olivier Monnier, Fréderic Rimet & Agnès Bouchez submitted to “Molecular... |
Dec 4, 2018
Rivera, Sinziana; Vasselon, Valentin; Chardon, Cécile; Guéguen, Julie; Bouchez, Agnès; Rimet, Frédéric, 2018, "Bioindication diatomées : comparaison microscopie / barcoding ADN. Données brutes Fastq 2016 + 2017, Test des différentes stratégies bioinfo sur données 2016. Projet AFB numéro 15000239 / A30.", https://doi.org/10.15454/9EG5Z4, Portail Data INRAE, V1, UNF:6:ajEMExtsrc4xeT8GdJzfgQ== [fileUNF]
Fichiers fastq rassemble tous les fichier fastq des échantillons de 2016 et 2017 Ils sont numérotés de 1.fastq à 464.fastq La correspondance avec les échantillons est donné dans le fichier Suivi_Mothur_Run_Dreal_2016_2017.xlsx Test des différentes stratégies bioinfo - data 2016.z... |
Dec 1, 2020
Chonova, Teofana; Vasselon, Valentin; Bouchez, Agnès; Rimet, Frédéric, 2020, "A ready-to-use database for mothur: Diat.barcode_rbcL_263bp_mothur based on Diat.barcode v9", https://doi.org/10.15454/SOMFSU, Portail Data INRAE, V2
Ready to use database adapted from Diat.barcode v9 for MOTHUR |
