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1 to 10 of 30 Results
Apr 13, 2018 - Biogeco Dataverse
Lesur Kupin, Isabelle, 2018, "TREEPEACE: Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand",, Portail Data INRAE, V1
Le jeu de données est constitué de 191,281 SNPs identifiés dans 297 arbres (mélange de Q. robur et Q. petraea) situés dans la forêt de La Petite Charnie. Ces SNPs ont été détectés sur le génome de référence du chêne 3P, obtenu dans le cadre du projet ANR Genoak et hébergé par l'U...
Oct 19, 2018 - URGI Plant and Fungi Dataverse
URGI, 2018, "Transposable element annotation of Botrytis cinerea B05.10",, Portail Data INRAE, V1
The TEdenovo was launched on Botrytis cinerea strain B05.10 whole genome (18 chromosomes, NCBI bioProject PRJNA264284, assembly ASM83294v1). The TE Consensus library from the TEdenovo (36 consensus) was filtered out for consensus sequences classified as SSR, or noCat built from l...
Oct 4, 2018 - URGI Plant and Fungi Dataverse
Quesneville, Hadi, 2018, "Transposable element annotation of Arabidopsis lyrata subsp. lyrata",, Portail Data INRAE, V1
After running the TEdenovo, we got a filtered library (without the SSR consensus and without the unclassified consensus if they were generated with less than 10 HSPs). We have clustered this library and the cluster number is in the header of each consensus. After a first TEannot...
Apr 27, 2020 - Dynafor dataverse
Ratsimba, Nirina, 2020, "SEcoMod Project - Meta-analysis dataset",, Portail Data INRAE, V1, UNF:6:qcrKTer+7GtD4DvwOkCbBQ== [fileUNF]
This dataset was build in order to conduct a meta-analysis on the influence of landscape and agricultural practices on conservation biological control. It includes: a list of studies selected from a Web Of Science request, an ontology of indicators used to describe landscape and...
Sep 9, 2020
Penouilh-Suzette, Charlotte; Blanchet, Nicolas; Bonnafous, Fanny; de Givry, Simon; Dinis, Romain; Brouard, Céline; Duruflé, Harold; Gody, Louise; Grassa, Christopher; Heudelot, Xavier; Laporte, Marion; Mangin, Brigitte; Marage, Gwenola; Mayjonade, Baptiste; Pomiès, Lise; Langlade, Nicolas, 2020, "RNA expression dataset of 384 sunflower hybrids in field condition",, Portail Data INRAE, V1, UNF:6:xMjpZQ4qQiTsbFqjJMoTXg== [fileUNF]
This article describes how RNA expression data of 173 genes were produced on 384 sunflower hybrids grown in field conditions. Sunflower hybrids were selected to represent genetic diversity within cultivated sunflower. The RNA was extracted from mature leaves at one time 7 days af...
Dec 10, 2020
Maillet, Aurelien; Bouju-Albert, Agnès; Roblin, Steven; Vaissié, Pauline; Leuillet, Sébastien; Xavier, Dousset; Jaffrès, Emmanuel; Combrisson, Jérôme; Prévost, Hervé, 2020, "Replication data for : Impact of DNA extraction and sampling methods on bacterial communities monitored by 16S rDNA metabarcoding in cold-smoked salmon and processing plant surfaces",, Portail Data INRAE, V1, UNF:6:Y4M66Nm6dM6RkbbWiFEqzw== [fileUNF]
Information data on the diversity of bacterial communities present on 12 samples of cold smoked salmon, 18 samples of stainless steal coupons placed in a food processing environment and 115 samples of stainless steal and tri-polyurethane coupons placed in a food processing enviro...
Jun 19, 2020 - Experimental - Observation - Simulation Dataverse
Laurent, Benoit, 2020, "QTL mapping for aggressiveness variation in F. graminearum revealed one causal mutation in FgVe1 velvet protein",, Portail Data INRAE, V3, UNF:6:qUH16O3A8fgmJb269Xa6Tw== [fileUNF]
Fusarium graminearum is one of the most frequent causal agent of the Fusarium Head Blight in the world, a cereal disease spread throughout the world, reducing grain production and quality. F. graminearum isolates are genetically and phenotypically highly diverse. Notably, remarka...
Apr 23, 2019
Ollitrault, Martine; Jeannot, Nicolas, 2019, "Physico-chemical parameters of river water in Scorff and its tributaries (Morbihan county - France)",, Portail Data INRAE, V2, UNF:6:9kn2WvojRLPch2betimtOg== [fileUNF]
The data consist of physico-chemical parameters of river water in Scorff and its tributaries, collected since 1999. The parameters are water temperature (°C), hydrogen potential (pH), conductivity, turbidity, nitrates (NO3-), ammonium (NH4+) and ortophosphates (PO4 ---). This dat...
Apr 12, 2019 - Experimental - Observation - Simulation Dataverse
Ollitrault, Martine; Delanoë, Richard; Destouches, Jean-Pierre; Huteau, Dominique; Tremblay, Julien; Marchand, Frédéric, 2019, "Physico-chemical parameters of river water in Oir and its tributaries (Manche county - France)",, Portail Data INRAE, V2, UNF:6:FNIb/2X36yQKBXl/Sc2DpA== [fileUNF]
The data consist of physico-chemical parameters of river water in Oir and its tributaries, collected since 2001. The parameters are water temperature (°C), hydrogen potential (pH), conductivity, turbidity, nitrates (NO3-), nitrites (NO2-), ammonium (NH4+) and ortophosphates (PO4...
Dec 1, 2020 - UMR ECOBIOP 1224 INRAE/UPPA Dataverse
Labonne, Jacques; Manicki, Aurélie; Tétillon, Marin, 2020, "Microsatellite typing data for Labonne et al. 2020 - Genes special issue",, Portail Data INRAE, V2
These data files provide the genotypes for 15 microsatellite markers in two populations using the NewHybrids format file, in order to determine the pedigree of individuals. They also provide file format to run analyses in Colony for families assignations.
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