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Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne; Grynberg, Priscila; Togawa, Roberto, 2020, "Orthofinder rooted species tree", https://doi.org/10.15454/MBMOQC, Portail Data INRAE, V1
Rooted phylogenomics species tree performed by Orthofinder on the 63 species, in Newick format. An annotated version of the tree in PDF format, produced with iTOL is also available.
Aug 5, 2020
Ehrenmann, Francois; Plomion, Christophe, 2020, "Oak Genome Sequencing Website", https://doi.org/10.15454/WSMRIN, Portail Data INRAE, V2
The oak genome sequencing website, concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees, is a permanent resource by INRAE, available at http://www.oakgenome.fr/. It provides access to various resources : oak genome b...
Jul 3, 2020 - Transposons mobility in M. incognita
Kozlowski, Djampa; Hassanaly-Goulamhoussen, Rahim; Danchin, Eienne, 2020, "Experimental validations of TE-impacted coding or regulatory loci", https://doi.org/10.15454/NQAF31, Portail Data INRAE, V2
Contains experimental validations results. The sup_mat_2.pptx file summarize: i) Characteristics of the tested loci: position in the genome, inserted TE, the region surrounding the insertion point, TE frequency values per isolate, experimental design (primers sequences, Tm), ii)...
Oct 30, 2019 - Experimental - Observation - Simulation Dataverse
Rahbe, Yvan; Guschinskaya, Natalia; Ressnikoff, Denis, 2019, "Histology of L4 aphid head-stylets", https://doi.org/10.15454/QUM1LQ, Portail Data INRAE, V2
Aphids were fixed overnight in 4% paraformaldehyde (PFA)-PBS solution at 4°C. After fixation, the samples were washed 3 times for 10 min each in phosphate buffered saline (PBS). The aphids were then transferred into aqueous 35% H2O2 for one week until the cuticle turned light-yel...
Oct 13, 2019 - Experimental - Observation - Simulation Dataverse
Rahbe, Yvan; Guschinskaya, Natalia; Ressnikoff, 2019, "Confocal cleared L4 aphid head-stylets", https://doi.org/10.15454/VPUGUG, Portail Data INRAE, V1
Confocal cleared L4 aphid heads: Aphids were cleared/treated after "Smolla M, Ruchty M, Nagel M, Kleineidam CJ: Clearing pigmented insect cuticle to investigate small insects' organs in situ using confocal laser-scanning microscopy (CLSM). Arthropod structure & development 2014,...
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