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1 to 10 of 14 Results
AMAP ECOPICS(INRA - Institut National de la Recherche Agronomique)
Oct 8, 2020AMAP
May 14, 2019
Mougin, Christian, 2018, "BRC4Env, the Biological Resource Centre for the Environment", https://doi.org/10.15454/TRBJTB, Portail Data INRAE, V2
BRC4Env, the network of Biological Resource Centres for the Environment, aims at storing and providing environmental resources (biological material and associated data), in a secure way and an optimal traceability. BRC4Env supports both fundamental and applied research based on a...
Aug 10, 2018
Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnès, 2018, "Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)", https://doi.org/10.15454/HYRVUH, Portail Data INRAE, V1
Method followed to obtain the Rsyst::diatom_rbcl_align_312bp database: 1/ Extraction of the 312bp rbcL barcode from the full Rsyst::diatom database rbcL alignment (using Diat_rbcL_108F and R3 primers). 2/ Sequences with ambiguities (N), homopolymers > 8 and length < 312bp are rem...
Aug 3, 2018 - Omics Dataverse
Pauvert, Charlie; Buée, Marc; Laval, Valérie; Edel-Hermann, Véronique; Fauchery, Laure; Gautier, Angélique; Lesur Kupin, Isabelle; Vallance, Jessica; Vacher, Corinne, 2018, "DNA metabarcoding of a mock community of 189 fungal strains associated to plants and soils.", https://doi.org/10.15454/8CVWRR, Portail Data INRAE, V1
This sequence dataset (FASTQ format) was obtained by metabarcoding an artificial (mock) fungal community. The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pair and sequenced on an Illumina MiSeq platform (v3 chemistry, 2x250 bp)...
Jul 19, 2018
Chaumeil, Philippe; Fischer-Le Saux, Marion; Frigerio, Jean-Marc; Grenier, Eric; Rimet, Frédéric; Streito, Jean-Claude; Laval, Valérie; Franc, Alain, 2018, "R-Syst: a network providing curated molecular databases and data analysis tools for taxonomy and systematics (Prokaryotes and Eucaryotes)", https://doi.org/10.15454/OEDAUS, Portail Data INRAE, V1
R-Syst network deals about systematic and (meta) barcoding and provide curated molecular databases for species identification and provide tools for diagnosis and inventories. The stakes are at the same time a precise diagnosis of organisms of interest (for example pathogens detec...
Jul 12, 2018
Rimet, Frédéric; Chardon, Cécile; Lainé, Leslie; Bouchez, Agnès; Domaizon, Isabelle; Guillard, Jean; Jacquet, Stéphan, 2018, "Thonon Culture Collection -TCC- a freshwater microalgae collection", https://doi.org/10.15454/UQEMVW, Portail Data INRAE, V1
The main objectives of the TCC are to maintain cultures and uncultured samples of freshwater microalgae and to ensure their availability for : - Research projects (research scientists, PhD students). - Development projects (industrial companies). - Practical work in education. -...
AMAP(INRA - Institut National de la Recherche Agronomique)
AMAP logo
Jun 18, 2018
L'UMR AMAP ( BotAnique et Modélisation de l'Architecture des Plantes et des végétations ) est une unité interdisciplinaire qui travaille à l'acquisition de connaissances fondamentales sur les plantes et les végétations dans le but de prévoir la réponse des écosystèmes aux forçage...
Biogeco Dataverse(INRAE - Institut national de recherche pour l’agriculture, l’alimentation et l’environnement - www.inrae.fr)
Biogeco Dataverse logo
May 18, 2018Experimental - Observation - Simulation Dataverse
BIOGECO (BIOdiversité, GEnes & COmmunautés) est une Unité Mixte de Recherche (UMR) de l’INRAE et de l’université de Bordeaux. L’unité comprend des spécialistes de l’écologie, de la génétique des populations, quantitative et évolutive. Les activités de recherche menées par BIOGECO...
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