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1 to 10 of 19 Results
Jan 5, 2021
Corso, Massimiliano; Magniette, Marie-Laure; Delannoy, Etienne, 2021, "Untageted metabolomic analyses on seeds of six Camelina sativa varieties cultivated for five consecutive years - R Script", https://doi.org/10.15454/A3QKZI, Portail Data INRAE, V1
See https://doi.org/10.15454/ATTENN, Portail Data INRAE, V1 for a full description of the experiment. Statistical analyses on untargeted metabolomic data Raw data were normalised on the internal standard (Apigenin) and weight of seeds used for the extraction. Normalised metabolit...
Dec 4, 2020
Boutet, Stephanie; Barreda, Léa; Perreau, François; Mouille, Grégory; Lepiniec, Loïc; Corso, Massimiliano, 2020, "Untageted metabolomic analyses on seeds of six Camelina sativa varieties cultivated for five consecutive years", https://doi.org/10.15454/ATTENN, Portail Data INRAE, V1
Samples collection: Six different cultivars of camelina were grown at the experimental farm of Bologna University (Italy) located in Cadriano (Bologna, Italy, 44°30′N, 11°23′E, 32 m a.s.l.) during five consecutive years (2015 - 2019). The six tested cultivars were: MIDAS (AAFC, S...
Oct 4, 2018 - URGI Plant and Fungi Dataverse
Quesneville, Hadi, 2018, "Transposable element annotation of Arabidopsis lyrata subsp. lyrata", https://doi.org/10.15454/INYUVZ, Portail Data INRAE, V1
After running the TEdenovo, we got a filtered library (without the SSR consensus and without the unclassified consensus if they were generated with less than 10 HSPs). We have clustered this library and the cluster number is in the header of each consensus. After a first TEannot...
Aug 7, 2020 - PMB Metabolomics
Deborde, Catherine, 2020, "Sunflower xylem sap NMR-based Metabolomics - Low [Cd] exposition", https://doi.org/10.15454/WEIXCP, Portail Data INRAE, V2, UNF:6:SOmZDpj3dVza5NuskRNxzA== [fileUNF]
1D 1H-NMR metabolomic profiling of xylem sap in two sunflower cultivars exposed to low Cd concentrations in hydroponics.
Sep 9, 2020
Penouilh-Suzette, Charlotte; Blanchet, Nicolas; Bonnafous, Fanny; de Givry, Simon; Dinis, Romain; Brouard, Céline; Duruflé, Harold; Gody, Louise; Grassa, Christopher; Heudelot, Xavier; Laporte, Marion; Mangin, Brigitte; Marage, Gwenola; Mayjonade, Baptiste; Pomiès, Lise; Langlade, Nicolas, 2020, "RNA expression dataset of 384 sunflower hybrids in field condition", https://doi.org/10.15454/HESVA0, Portail Data INRAE, V1, UNF:6:xMjpZQ4qQiTsbFqjJMoTXg== [fileUNF]
This article describes how RNA expression data of 173 genes were produced on 384 sunflower hybrids grown in field conditions. Sunflower hybrids were selected to represent genetic diversity within cultivated sunflower. The RNA was extracted from mature leaves at one time 7 days af...
Jul 3, 2020 - Metabolome of tomato fruit pericarp of gbp1-c CRISPR mutant
Bernillon, Stéphane, 2020, "Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type", https://doi.org/10.15454/IFPJAP, Portail Data INRAE, V1
Positive mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.
Jul 2, 2020 - Metabolome of tomato fruit pericarp of gbp1-c CRISPR mutant
Bernillon, Stéphane, 2020, "Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type", https://doi.org/10.15454/YVKQRW, Portail Data INRAE, V1
Negative mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.
Jan 8, 2021 - Metabolomic responses of maize leaf to progressive controlled chilling
Urrutia, Maria; Bernillon, Stéphane; Moing, Annick, 2020, "LC-MS metabolomic analyses of maize young leaf cultivated in a growth chamber", https://doi.org/10.15454/J9KO72, Portail Data INRAE, V2, UNF:6:HTEu5gdg6G3uO2MDAMHGWQ== [fileUNF]
Analyses performed on 18 genetically-diverse hybrids using leaf methanolic extracts.
Sep 18, 2019 - Omics Dataverse
Decroocq, Veronique, 2019, "Japanese plum small RNA sequencing", https://doi.org/10.15454/O07SXQ, Portail Data INRAE, V1
Deep sequencing of non-transgenic and eIFiso4G-silenced transgenic Japanese plum (Prunus salicina) small RNA libraries. Cultivar Angeleno. Files are in fastq format, compressed in gz
Dec 8, 2020 - ThaliaDB maize Dataverse
Nicolas, Stéphane; Madur, Delphine; Charcosset, Alain; Bauland, Cyril; Combes, Valérie; Berard, Aurélie; Arca, Mariangela; Mary-Huard, Tristan; Le Paslier, Marie-Christine; Gouesnard, Brigitte, 2020, "Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array", https://doi.org/10.15454/GANJ7J, Portail Data INRAE, V1, UNF:6:IvZiMGs4Oo8oWZqgBbcDdA== [fileUNF]
R scripts and fluorescence intensity datasets of 24 controlled pools and 327 inbred lines panels extracted from 50K Illumina Infinium HD array (Ganal et al., 2010). These datasets and R scripts can be used to calibrate a model to predict allelic frequencies in new DNA bulks using...
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