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1 to 10 of 142 Results
May 17, 2021 - UMR ECOBIOP 1224 INRAE/UPPA Dataverse
Lange, Frederic, 2021, "Températures Aquapôle INRAE", https://doi.org/10.15454/8IL3LJ, Portail Data INRAE, V2
Petit fleuve côtier de 39 km de long, la Nivelle est une rivière à migrateurs (saumon, alose, truites de mer) et ses populations sont suivies depuis le début des années 80. Ce Dataset présente un classeur Excel qui décrit les relevés de températures qui sont effectués quotidienne...
May 17, 2021 - URGI Plant and Fungi Dataverse
Michotey, Celia; Vauthier, Denis; Fady, Bruno, 2021, "Phenotypic trait dataset of Pinus pinea measured in the common gardens of the Forest Genetics Network for Research and Experimentation (GEN4X)", https://doi.org/10.15454/MQKQ1O, Portail Data INRAE, V1
This dataset is composed of observations such as height, circumference, cone number, survival and forking, made until 2012 in 7 Pinus pinea provenance trials of the French common gardens network GEN4X (forest genetics network for research and experimentation). It makes possible t...
May 6, 2021 - Experimental - Observation - Simulation Dataverse
Desbiez-Piat, Arnaud; Dillmann, Christine; Tenaillon, Maud, I., 2021, "Interplay between high drift and high selection in small selfing maize populations : simulator and summary data", https://doi.org/10.15454/JQABMJ, Portail Data INRAE, V1, UNF:6:FkZOmro4EhQgfvnOnfSRww== [fileUNF]
A R script that simulates the evolution of a quantitative trait in Saclay's Divergent Selection Experiments (Saclay's DSEs) breeding schemes, along with a dataset containing summary statistics on the observed response to selection for maize flowering time in Saclay's DSE's
May 5, 2021
Oddou-Muratorio, Sylvie; Gauzere, Julie, 2021, "Phenotypic and genotypic data of a European beech (Fagus sylvatica L.) progeny trial issued from three plots along an elevation gradient in Mont Ventoux, South-Eastern France", https://doi.org/10.15454/6HETQP, Portail Data INRAE, V1, UNF:6:sUzc5y/w2eRwFt0O/3KSVw== [fileUNF]
We provide phenotypic and genotypic data for a progeny trial of 5813 European beech seedlings, originating from 60 open-pollinated families collected at three altitudes (1020 m; 1140 m,1340m) on Mont Ventoux (44 ˚ 11’ N; 17 ˚ 5’ E)
Apr 27, 2021
Martin, Philippe; Rabenandrasana, Nadège; Poméon, Thomas; Serard, Philippe, 2021, "RPG Explorer Crop successions France 2007-2014, 2007-2019, 2015-2019", https://doi.org/10.15454/XH84QB, Portail Data INRAE, V2, UNF:6:WJbvCafksh00/+PmNl2Zcg== [fileUNF]
An English translation of this metadata is available below after the french version. Les séquences de cultures s'appuient sur les données du Registre Parcellaire Graphique fournies par l'Agence de Service et de Paiement pour les années 2007 à 2014 et par l'IGN pour les années 201...
Apr 26, 2021 - Parasitic transcriptome regulation in M. incognita
Danchin, Etienne; Pere, Arthur, 2021, "Enriched GO terms in the eight clusters of differentially expressed genes", https://doi.org/10.15454/V3SCRC, Portail Data INRAE, V1, UNF:6:zAVi7N8nqLznWAQu0l7wPg== [fileUNF]
Enriched gene ontology terms in each of the eight clusters of differentially-expressed M. incognita genes. For each cluster (A-H), enriched GO terms, as compared to the whole set of differentially expressed genes, were identified using a hypergeometric test as implemented in the...
Apr 26, 2021 - Parasitic transcriptome regulation in M. incognita
Danchin, Etienne; Grynberg, Priscila, 2021, "Mapping of known effector genes on five Meloidogyne genomes", https://doi.org/10.15454/P5YIGX, Portail Data INRAE, V1
Based on the literature, we established a manually curated list of M. incognita genes specifically expressed in sub-ventral or dorsal secretory gland cells. We started from the list published in (Truong, Nguyen, Abad, Quentin, & Favery, 2015) and manually checked the figures asso...
Apr 26, 2021 - Parasitic transcriptome regulation in M. incognita
Danchin, Etienne; Da Rocha, Martine; Eves-van den Akker, Sebastian; Bournaud, Caroline, 2021, "Genes differentially expressed across four life stages in M. incognita and GO enrichments", https://doi.org/10.15454/VLN8UC, Portail Data INRAE, V1, UNF:6:+u0fQZJ31YfvnCdRJnanQg== [fileUNF]
Meloidogyne incognita protein-coding genes differentially expressed at four stages during the parasitic life cycle: - eggs - pre-parasitic second stage juvenile (J2) - mix of parasitic second, third and fourth stage juveniles (J3) - adult females The genes show significantly diff...
Apr 23, 2021
Flesselle, Aurelie; Josset, Quentin; Macquet, Tony; Petit, Laurent; Lecoeur, Lucie; Fagard, Jean-Louis; Fournel, Françoise; Euzenat, Gilles, 2021, "Data on migratory fish from the Bresle river (1981 to 2021; Seine-Maritime and Somme county - France)", https://doi.org/10.15454/TGABY7, Portail Data INRAE, V1
The data consists of data on migratory fish from the Bresle river since 1981 collected for the Environmental Research Observatory (ORE) on Diadromous Fish in Coastal rivers (DiaPFC). ORE DiaPFC is a research infrastructure focused on studying the influence of human-induced and en...
Apr 23, 2021
Plaza Onate, Florian; Ghozlane, Amine; Almeida, Mathieu, 2021, "An updated catalog of genes and species of the pig gut microbiota", https://doi.org/10.15454/OPAULL, Portail Data INRAE, V1, UNF:6:Ggdc9+Ypa5HI+KYp/YYwqw== [fileUNF]
Dataset overview We built an updated catalog of 9.3M genes found in the pig gut microbiota. Co-abundant genes were binned in 1523 Metagenomic Species Pan-genomes (MSPs) for which we provide taxonomic labels and a phylogenetic tree. In addition, we reconstituted 7059 Metagenome-As...
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