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1 to 10 of 22 Results
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne; Grynberg, Pirsicila; Togawa, Roberto, 2020, "PPN-specific candidate effectors expressed in endophytic phases of M. incognita parasitic life cycle", https://doi.org/10.15454/WBZZ5M, Portail Data INRAE, V1, UNF:6:Q6V0cPfaBNCHOg5KABL/1g== [fileUNF]
Annotated list of M. incognita candidate effector proteins that fulfil these criteria: - the proteins are PPN-specific according to orhtofinder and return no significant hit over than in other PPN against the NCBI's nr. - the protein does not belong to a multigene family - the co...
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne; Grynberg, Priscila; Togawa, Roberto, 2020, "Annotated list of species used in this study", https://doi.org/10.15454/IIAQOW, Portail Data INRAE, V1
Annotated list of the 63 species used in the Orthofinder comparative analysis of nematodes (61 species) and two tardigrade species as out-groups. Description: Lines 1-64, definition of columns - Abbrev Species: abbreviated species name. Species identifiers used in all the Orthofi...
Aug 7, 2020 - CORNPESTS
Sanane, Inoussa; Dillmann, Christine; Legrand, Judith; Marion-Poll, Frédéric, 2020, "R scripts and datas for the analysis of Lepidoptera feeding bioassays", https://doi.org/10.15454/CRIUDY, Portail Data INRAE, V2, UNF:6:hTGs+txMHPvB7l9yZIPEzg== [fileUNF]
Rscripts, raw datas, and documentation associated to the statistical analysis of the data produced by the Sanane Lepidoptera feeding bioassay.
Aug 5, 2020
Ehrenmann, Francois; Plomion, Christophe, 2020, "Oak Genome Sequencing Website", https://doi.org/10.15454/WSMRIN, Portail Data INRAE, V2
The oak genome sequencing website, concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees, is a permanent resource by INRAE, available at http://www.oakgenome.fr/. It provides access to various resources : oak genome b...
Jul 16, 2020 - Omics Dataverse
Fort, Tania; Pauvert, Charlie; Zanne, Amy; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2020, "Bioinformatic and statistical scripts to analyze metabarcoding data of fungal communities", https://doi.org/10.15454/0CNFWS, Portail Data INRAE, V1, UNF:6:AbAHJCHSVEP+kwY2z9TN7A== [fileUNF]
This dataset contains R-scripts to analyse the diversity and composition of seed fungal communities (Fort et al., Maternal effects shape seed fungal communities in Quercus petraea. Submitted). The bioinformatic script was applied to raw sequences after paired-end sequences were j...
May 15, 2020 - Experimental - Observation - Simulation Dataverse
Chabert, Ariane; Marchand, Damien; Sarthou, Jean-Pierre, 2019, "Data from extensive comparative measurements of conventional, conservation and organic agricultures in Southwestern France", https://doi.org/10.15454/KEW1GK, Portail Data INRAE, V4, UNF:6:p5Dluu6TBsiRLpQiObqmOw== [fileUNF]
Observational and experimental data of crop pests, crop pest natural enemies, soil sensitivity to erosion, crop productivity, pathogenic fungal infection and root colonization by mycorrhiza in conventional, conservation and organic agricultures near Toulouse, France.
May 14, 2020 - Experimental - Observation - Simulation Dataverse
Laurent, Benoit, 2020, "Microhaplotype genotyping-by-sequencing of 98 highly polymorphic markers in three chestnut tree species", https://doi.org/10.15454/PNBEAM, Portail Data INRAE, V5, UNF:6:vfR+Xz1fRgxgxhqS02yR2g== [fileUNF]
Chestnut species have large ecological, cultural and economic importance. Developing genetic markers for these species is of interest for conservation, breeding or evolutionary studies. We designed 192 primer pairs targeting microsatellites detected in the Castanea mollissima ref...
May 5, 2020
Montarry, Josselin, 2020, "Hatching-data_Gautier-et-al_FIM", https://doi.org/10.15454/THNCAC, Portail Data INRAE, V1, UNF:6:Qx5HAPMFz/q1+QdYIuPKWA== [fileUNF]
Hatching rates of Globodera pallida in native and recolonized soils (A, D, F and J) for each replicate in each modality (dose 1, dose 2 and control).
Mar 19, 2020
Montarry, Josselin, 2020, "RawData Gautier-et-al EcolEvol", https://doi.org/10.15454/H1PJ5Q, Portail Data INRAE, V1, UNF:6:oPZU1FfqWPSNOYf2VvFkGg== [fileUNF]
Hatching percentage of each pair of nematode/potato (each line is a replicate)
Feb 18, 2020 - Omics Dataverse
Vacher, Corinne, 2020, "R scripts used to infer microbial networks from metabarcoding data and validate them using text-mining", https://doi.org/10.15454/5WD6P6, Portail Data INRAE, V1, UNF:6:LNjhKptvEnA9T2eqRWfBNQ== [fileUNF]
R scripts and datafiles used to infer microbial association networks from metabarcoding data of grapevine foliar samples infected or not by powdery mildew (Erysiphe necator). R script used to search for microbial associations in the Scopus database.
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