Portail Data INRAE

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Type: (datasets) Publication Year: 2018 Type: (datasets) Subject: Omics Type: (datasets) Data Origin: experimental data

1 to 6 of 6 Results

Diat.barcode, an open-access barcode library for diatoms Nov 13, 2020 Rimet, Frederic; Chonova, Teofana; Gassiole, Gilles; Gusev, Evgenuy; Kahlert, Maria; Keck, François; Kelly, Martyn; Kulikovskiy, Maxim; Maltsev, Yevhen; Mann, David; Pfannkuchen, Martin; Trobajo, Rosa; Vasselon, Valentin; Wetzel, Carlos; Zimmermann, Jonas; Bouchez, Agnès, 2018, "Diat.barcode, an open-access barcode library for diatoms", https://doi.org/10.15454/TOMBYZ, Portail Data INRAE, V10 Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton and which make a major contribution to the productivity of oceans and freshwaters. They display a huge diversity, which makes them excellent ecological indicators of aquatic ecosystems, and...
FRIM - Fruit Integrative Modelling Jul 15, 2020 - Experimental - Observation - Simulation Dataverse Bénard, Camille; Biais, Benoit; Ballias, Patricia; Beauvoit, Bertrand; Bernillon, Stéphane; Cabasson, Cécile; Colombié, Sophie; Deborde, Catherine; Gaillard, Pierre; Génard, Michel; Gibon, Yves; Jacob, Daniel; Maucourt, Mickael; Moing, Annick; Vercambre, Gilles, 2018, "FRIM - Fruit Integrative Modelling", https://doi.org/10.15454/95JUTK, Portail Data INRAE, V5 The project aimed to build a virtual tomato fruit that enables the prediction of metabolite levels given genetic and environmental inputs, by an iterative process between laboratories which combine expertise in fruit biology, ecophysiology, theoretical and experimental biochemist...
Bovine embryo gene profiles Nov 25, 2018 Hue, Isabelle, 2018, "Bovine embryo gene profiles", https://doi.org/10.15454/GQCART, Portail Data INRAE, V1, UNF:6:g2SHPpkj5oqEQDXhriW4zw== [fileUNF] Gene Set Enrichment Analyses (GSEA) and Differentially Expressed Genes (DEG) defining the molecular profiles of bovine blastocysts produced in vitro
Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019) Jun 25, 2018 Loudet, Olivier, 2018, "Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019)", https://doi.org/10.15454/EORHL8, Portail Data INRAE, V1 Each row represents a single HIF and the genotype of the F7 RIL it originates from is indicated along the chromosomes with RIL ID, markers and genotypic conventions from Publiclines http://publiclines.versailles.inra.fr/rils/index (i.e. 'A' = Col allele; 'B' = alternate parental...
Raw phenotypic data obtained on the Arabidopsis RILs with the Phenoscope robots (Marchadier, Hanemian, Tisné et al., 2019) Jun 25, 2018 Loudet, Olivier, 2018, "Raw phenotypic data obtained on the Arabidopsis RILs with the Phenoscope robots (Marchadier, Hanemian, Tisné et al., 2019)", https://doi.org/10.15454/OCOP9B, Portail Data INRAE, V1 This dataset gathers the main raw phenotypic data obtained and exploited in Marchadier, Hanemian, Tisné et al. (2019). It contains data from 4 RIL sets across 9 Phenoscope experiments. For each Phenoscope experiment, Recombinant Inbred Line (RIL) and Condition ('WW' = Well Watere...
Adaptation of S. cerevisiae to fermented food environments reveals remarkable genome plasticity and the footprints of domestication. Mar 23, 2018 - Omics Dataverse Legras, Jean-Luc; Galeote, Virginie; Bigey, Frédéric; Camarasa, Carole; Marsit, Souhir; Nidelet, Thibault; Sanchez, Isabelle; Couloux, Arnaud; Guy, Julie; Franco-Duarte, Ricardo; Marcet-Houben, Marina; Gabaldon, Toni; Schuller, Dorit; Sampaio, José Paulo; Dequin, Sylvie, 2018, "Adaptation of S. cerevisiae to fermented food environments reveals remarkable genome plasticity and the footprints of domestication.", https://doi.org/10.15454/2VZ16D, Portail Data INRAE, V1 Different Variant data set combining genotypic data data from the newly sequenced strains and data from available genomes sequences obtained at SGD. Data at vcf format or at hapmap format (.ped files).

Diat.barcode, an open-access barcode library for diatoms

Nov 13, 2020

Rimet, Frederic; Chonova, Teofana; Gassiole, Gilles; Gusev, Evgenuy; Kahlert, Maria; Keck, François; Kelly, Martyn; Kulikovskiy, Maxim; Maltsev, Yevhen; Mann, David; Pfannkuchen, Martin; Trobajo, Rosa; Vasselon, Valentin; Wetzel, Carlos; Zimmermann, Jonas; Bouchez, Agnès, 2018, "Diat.barcode, an open-access barcode library for diatoms", https://doi.org/10.15454/TOMBYZ, Portail Data INRAE, V10

Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton and which make a major contribution to the productivity of oceans and freshwaters. They display a huge diversity, which makes them excellent ecological indicators of aquatic ecosystems, and...

FRIM - Fruit Integrative Modelling

Jul 15, 2020 - Experimental - Observation - Simulation Dataverse

Bénard, Camille; Biais, Benoit; Ballias, Patricia; Beauvoit, Bertrand; Bernillon, Stéphane; Cabasson, Cécile; Colombié, Sophie; Deborde, Catherine; Gaillard, Pierre; Génard, Michel; Gibon, Yves; Jacob, Daniel; Maucourt, Mickael; Moing, Annick; Vercambre, Gilles, 2018, "FRIM - Fruit Integrative Modelling", https://doi.org/10.15454/95JUTK, Portail Data INRAE, V5

The project aimed to build a virtual tomato fruit that enables the prediction of metabolite levels given genetic and environmental inputs, by an iterative process between laboratories which combine expertise in fruit biology, ecophysiology, theoretical and experimental biochemist...

Bovine embryo gene profiles

Nov 25, 2018

Hue, Isabelle, 2018, "Bovine embryo gene profiles", https://doi.org/10.15454/GQCART, Portail Data INRAE, V1, UNF:6:g2SHPpkj5oqEQDXhriW4zw== [fileUNF]

Gene Set Enrichment Analyses (GSEA) and Differentially Expressed Genes (DEG) defining the molecular profiles of bovine blastocysts produced in vitro

Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019)

Jun 25, 2018

Loudet, Olivier, 2018, "Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019)", https://doi.org/10.15454/EORHL8, Portail Data INRAE, V1

Each row represents a single HIF and the genotype of the F7 RIL it originates from is indicated along the chromosomes with RIL ID, markers and genotypic conventions from Publiclines http://publiclines.versailles.inra.fr/rils/index (i.e. 'A' = Col allele; 'B' = alternate parental...

Raw phenotypic data obtained on the Arabidopsis RILs with the Phenoscope robots (Marchadier, Hanemian, Tisné et al., 2019)

Jun 25, 2018

Loudet, Olivier, 2018, "Raw phenotypic data obtained on the Arabidopsis RILs with the Phenoscope robots (Marchadier, Hanemian, Tisné et al., 2019)", https://doi.org/10.15454/OCOP9B, Portail Data INRAE, V1

This dataset gathers the main raw phenotypic data obtained and exploited in Marchadier, Hanemian, Tisné et al. (2019). It contains data from 4 RIL sets across 9 Phenoscope experiments. For each Phenoscope experiment, Recombinant Inbred Line (RIL) and Condition ('WW' = Well Watere...

Adaptation of S. cerevisiae to fermented food environments reveals remarkable genome plasticity and the footprints of domestication.

Mar 23, 2018 - Omics Dataverse

Legras, Jean-Luc; Galeote, Virginie; Bigey, Frédéric; Camarasa, Carole; Marsit, Souhir; Nidelet, Thibault; Sanchez, Isabelle; Couloux, Arnaud; Guy, Julie; Franco-Duarte, Ricardo; Marcet-Houben, Marina; Gabaldon, Toni; Schuller, Dorit; Sampaio, José Paulo; Dequin, Sylvie, 2018, "Adaptation of S. cerevisiae to fermented food environments reveals remarkable genome plasticity and the footprints of domestication.", https://doi.org/10.15454/2VZ16D, Portail Data INRAE, V1

Different Variant data set combining genotypic data data from the newly sequenced strains and data from available genomes sequences obtained at SGD. Data at vcf format or at hapmap format (.ped files).

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