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1 to 10 of 13 Results
Jun 11, 2020 - PMB Metabolomics
Deborde, Catherine; Roch, Léa; Moing, Annick; Jacob, Daniel, 2019, "1D 1H-NMR profiling of 8 fleshy fruits (mixed-stage samples)", https://doi.org/10.15454/BQHGR9, Portail Data INRAE, V3, UNF:6:CVoLl0fa9rXcSn5u2yGRmQ== [fileUNF]
1D 1H-NMR metabolomic profiling of 8 fleshy fruit species, including three herbaceous species, eggplant, pepper and cucumber, three tree species, apple, peach and clementine, and two vines, kiwifruit and grape. “stage-mixture sample”, dedicated to the identification of major solu...
Nov 21, 2019
Jardin, Julien, 2019, "Data from: Benefits and drawbacks of osmotic adjustment in Propionibacterium freudenreichii", https://doi.org/10.15454/VVNQHR, Portail Data INRAE, V1
Propionibacterium freudenreichii CIRM-BIA 129 and CIRM-BIA 1025 osmoadaptation in chemically defined medium (MMO) and osmoadaptation in the presence of glycine betaine (GB) were studied thanks to proteomics. Bacteria were harvested at the begining of stationary phase. Protein try...
Sep 18, 2019 - Omics Dataverse
Decroocq, Veronique, 2019, "Japanese plum small RNA sequencing", https://doi.org/10.15454/O07SXQ, Portail Data INRAE, V1
Deep sequencing of non-transgenic and eIFiso4G-silenced transgenic Japanese plum (Prunus salicina) small RNA libraries. Cultivar Angeleno. Files are in fastq format, compressed in gz
Sep 12, 2019
Jardin, Julien, 2019, "Data from Propionibacterium freudenreichii CIRM-BIA 129 osmoadaptation coupled to acid-adaptation increases its viability during freeze-drying", https://doi.org/10.15454/5CWCLL, Portail Data INRAE, V1
Propionibacterium freudenreichii CIRM-BIA 129 osmoadaptation and osmoadaptation coupled to acid adaptation were studied thanks to proteomics. Bacteria were harvested at the begining of stationary phase. Protein trypsin digestion were performed in solution. The data set contains 4...
Jul 30, 2019 - Omics Dataverse
Pauvert, Charlie; Vallance, Jessica; Delière, Laurent; Buée, Marc; Vacher, Corinne, 2019, "Amplicon Sequence Variant (ASV) table obtained by metabarcoding foliar fungal communities in conventional and organic vineyards", https://doi.org/10.15454/WOICSE, Portail Data INRAE, V1, UNF:6:PSwFBpb4Vxgr5rwUlkcPUQ== [fileUNF]
This Amplicon Sequence Variant (ASV) table was obtained by metabarcoding foliar fungal communities in conventional and organic vineyards. This table was generated after the application of the bioinformatics scripts (at https://doi.org/10.15454/NSHUAQ) to the sequences available a...
Jul 26, 2019 - Omics Dataverse
Lagrée Marie, 2019, "Impact of oxidative stress (H2O2) on Pseudomonas Graminis - LCMS dataset", https://doi.org/10.15454/ZAWDKQ, Portail Data INRAE, V2
Impact of atmospheric stresses on clouds microorganisms metabolism: the case of H2O2 Dataset: The dataset contains 32 files created from 500MHz NMR spectrometer and cdf files created from LC-MS system:62 samples and 9 CQP (pools) injected in positive ionization mode and 64 sample...
Jul 26, 2019 - Omics Dataverse
Lagrée Marie, 2019, "Impact of oxidative stress (H2O2) on Pseudomonas Graminis - NMR dataset", https://doi.org/10.15454/Q7VKT5, Portail Data INRAE, V2
Impact of atmospheric stresses on clouds microorganisms metabolism: the case of H2O2 : The dataset contains 32 files created from 500MHz NMR spectrometer and cdf files created from LC-MS system:62 samples and 9 CQP (pools) injected in positive ionization mode and 64 samples and 1...
Jul 25, 2019
Ma, Yuxin; Marais, Armelle; Lefebvre, Marie; Faure, Chantal; Candresse, Thierry, 2019, "Metagenomic analysis of virome cross-talk between cultivated Solanum lycopersicum and wild Solanum nigrum", https://doi.org/10.15454/S486RR, Portail Data INRAE, V1
We selected tomato (Solanum lycopersicum) and european black nightshade (Solanum nigrum) as a pair of related crop-weed species to study the diversity and potential flow of viral populations using high throughput sequencing (HTS) based metagenomics. A total of 20 libraries were p...
Jul 12, 2019
Ma, Yuxin; Marais-Colombel, Armelle; Lefebvre, Marie; Svanella-Dumas, Laurence; Faure, Chantal; Candresse, Thierry, 2019, "Viral metagenomic data for comparison of two viral sequence enrichment approaches", https://doi.org/10.15454/TVWBCQ, Portail Data INRAE, V1
This study aims at comparing the performance of two viral sequence enrichment approaches, double-stranded RNA (dsRNA) and Virion-associated nucleic acids (VANA) purification for the description of the viromes in various complex plant pools. In total 12 libraries were prepared for...
May 7, 2019 - Omics Dataverse
Pauvert, Charlie; Vallance, Jessica; Delière, Laurent; Buée, Marc; Vacher, Corinne, 2019, "DNA metabarcoding of foliar fungal communities in conventional and organic vineyards", https://doi.org/10.15454/3DPFNJ, Portail Data INRAE, V1
This sequence dataset (FASTQ format) was obtained by metabarcoding foliar fungal communities in conventional and organic vineyards. The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pair and sequenced on an Illumina MiSeq platfor...
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