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Jun 17, 2019 - ThaliaDB maize Dataverse
Nicolas, Stephane; Negro, Sandra; Millet, Emilie; Bauland, Cyril; Madur, Delphine; Combes, Valérie; Welcker, Claude; Tardieu, François; Charcosset, Alain, 2019, "DROPS maize GWAS analysis dataset", https://doi.org/10.15454/6TL2N4, Portail Data INRAE, V1
This dataset corresponds to the most significant SNP (-log(p-value)>5) identified by genome-wide association studies between the three traits (Flowering Time, Plant Height, Grain Yield) measured in 22 environments on a panel of 247 maize inbred lines. These analysis were conducte... |
Jun 17, 2019 - ThaliaDB maize Dataverse
Nicolas, Stéphane; Madur, Delphine; Negro, Sandra; Combes, Valérie; Bauland, Cyril; Tardieu, François; Millet, Emilie; Welcker, Claude; Charcosset, Alain, 2019, "DROPS maize genotyping elaborate dataset", https://doi.org/10.15454/AEC4BN, Portail Data INRAE, V1
These three dataset correspond to three elaborate genotyping matrix after filtering and imputation published by Negro et al., (2019) in BMC Plant Biology: "Genotyping-by-sequencing and SNP arrays are complementary for detecting quantitative trait loci by tagging different haploty... |
Sep 17, 2019 - ThaliaDB maize Dataverse
Nicolas, Stephane; Joet, Johann; Duarte Jorge; Pichon, Jean-Philippe; Pirani, Ali; Vitte, Clémentine; Riviere, Nathalie; Mabire, 2019, "CNVMaize Indels Affymetrix Axiom Array", https://doi.org/10.15454/DWB4UT, Portail Data INRAE, V1
These three datasets describe the content of Indel Affymetrix Axiom array corresponding to the publication "High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® Axiom® array " of Mabire, Duarte et al., 2019. The Affymetrix Ax... |
Millet, Emilie J.; Pommier, Cyril; Buy, Mélanie; Nagel, Axel; Kruijer, Willem; Welz-Bolduan, Therese; Lopez, Jeremy; Richard, Cécile; Racz, Ferenc; Tanzi, Franco; Spitkot, Tamas; Canè, Maria-Angela; Negro, Sandra S.; Coupel-Ledru, Aude; Nicolas, Stéphane D.; Palaffre, Carine; Bauland, Cyril; Praud, Sébastien; Ranc, Nicolas; Presterl, Thomas; Bedo, Zoltan; Tuberosa, Roberto; Usadel, Björn; Charcosset, Alain; van Eeuwijk, Fred A.; Draye, Xavier; Tardieu, François; Welcker, Claude, 2019, "A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios", https://doi.org/10.15454/IASSTN, Portail Data INRAE, V2, UNF:6:zF9w0A2f+MHeW7maeeXJWA== [fileUNF]
This dataset comes from the European Union project DROPS (DROught-tolerant yielding PlantS). A panel of 256 maize hybrids was grown with two water regimes (irrigated or rainfed), in seven fields in 2012 and 2013, respectively, spread along a climatic transect from western to east... |
