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1 to 4 of 4 Results
Sep 20, 2018 - Experimental - Observation - Simulation Dataverse
Marchand, Frederic; Aymes, Jean-Christophe; Gueraud, François; Guillard, Jean; Goulon, Chloé; Hamelet, Valérie; Lange, Frédéric; Prevost, Etienne; Baglinière, Jean-Luc; Beaulaton, Laurent; Penil, Caroline; Azam, Didier, 2018, "Colisa, the collection of ichthyological samples.", https://doi.org/10.15454/D3ODJM, Portail Data INRAE, V1
The collection of ichthyological samples, Colisa, results from the merging of historical samples collected by 3 INRA units (U3E in Rennes, ECOBIOP in Saint Pée sur Nivelle and CARRTEL in Thonon les Bains) and AFB-INRA Pole Gest’Aqua. These samples come from long term monitoring a...
Aug 10, 2018
Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnès, 2018, "Rsyst::diatom_rbcl_align_312bp database: a database adapted to DNA metabarcoding (version v7: 23-02-2018)", https://doi.org/10.15454/HYRVUH, Portail Data INRAE, V1
Method followed to obtain the Rsyst::diatom_rbcl_align_312bp database: 1/ Extraction of the 312bp rbcL barcode from the full Rsyst::diatom database rbcL alignment (using Diat_rbcL_108F and R3 primers). 2/ Sequences with ambiguities (N), homopolymers > 8 and length < 312bp are rem...
Aug 3, 2018 - Omics Dataverse
Pauvert, Charlie; Buée, Marc; Laval, Valérie; Edel-Hermann, Véronique; Fauchery, Laure; Gautier, Angélique; Lesur Kupin, Isabelle; Vallance, Jessica; Vacher, Corinne, 2018, "DNA metabarcoding of a mock community of 189 fungal strains associated to plants and soils.", https://doi.org/10.15454/8CVWRR, Portail Data INRAE, V1
This sequence dataset (FASTQ format) was obtained by metabarcoding an artificial (mock) fungal community. The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pair and sequenced on an Illumina MiSeq platform (v3 chemistry, 2x250 bp)...
Jun 25, 2018
Loudet, Olivier, 2018, "Genotypic description of the near isogenic lines (HIFs) used for QTL validation and significance of the observed segregating phenotypes (Marchadier, Hanemian, Tisné et al., 2019)", https://doi.org/10.15454/EORHL8, Portail Data INRAE, V1
Each row represents a single HIF and the genotype of the F7 RIL it originates from is indicated along the chromosomes with RIL ID, markers and genotypic conventions from Publiclines http://publiclines.versailles.inra.fr/rils/index (i.e. 'A' = Col allele; 'B' = alternate parental...
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