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1 to 10 of 15 Results
Dec 4, 2020
Boutet, Stephanie; Barreda, Léa; Perreau, François; Mouille, Grégory; Lepiniec, Loïc; Corso, Massimiliano, 2020, "Untageted metabolomic analyses on seeds of six Camelina sativa varieties cultivated for five consecutive years", https://doi.org/10.15454/ATTENN, Portail Data INRAE, V1
Samples collection: Six different cultivars of camelina were grown at the experimental farm of Bologna University (Italy) located in Cadriano (Bologna, Italy, 44°30′N, 11°23′E, 32 m a.s.l.) during five consecutive years (2015 - 2019). The six tested cultivars were: MIDAS (AAFC, S...
Nov 20, 2020
Tarnaud, Florian, 2020, "Differential Adaptation of Propionibacterium freudenreichii CIRM-BIA to cow's milk versus soymilk envirnments modulates its stress tolerance and proteome", https://doi.org/10.15454/G6NGSZ, Portail Data INRAE, V1
Propionibacterium freudenreichii adaptation to cow milk versus soymilk environments was studied thanks to proteomics. Bacteria were harvested at the begining of stationary phase. Protein trypsin digestion were performed in solution. The data set contains 19 files of NanoLC-MS/MS...
Oct 14, 2020
Paux, Etienne, 2020, "New insights into homoeologous copy number variations in the hexaploid wheat genome", https://doi.org/10.15454/C3XH6H, Portail Data INRAE, V1
Bread wheat is an allohexaploid species originating from two successive and recent rounds of hybridization between three diploid species that were very similar in terms of chromosome number, genome size, TE content, gene content and synteny. As a result, it has long been consider...
Oct 6, 2020
Jardin, Julien, 2020, "Data from "Brush border peptidase activity and intestinal transepithelial passage of oligopeptides from a whey protein hydrolysate in Ussing Chamber ex-vivo assays"", https://doi.org/10.15454/AIYGXO, Portail Data INRAE, V1
For many years it was believed that only amino acids, dipeptides and tripeptides could be absorbed and reach the bloodstream. Nowadays, the bioavailability of oligopeptides is also being considered, requiring further research. Hence, in this pilot study, the activity of the brush...
Sep 22, 2020
Jardin, Julien, 2020, "Environmental conditions modulate the protein content and immunomodulatory activity of extracellular vesicles produced by the probiotic Propionibacterium freudenreichii CIRM-BIA129", https://doi.org/10.15454/Q6PPXY, Portail Data INRAE, V2
Propionibacterium freudenreichii is a probiotic Gram-positive bacterium with promising immunomodulatory properties. It modulates regulatory cytokines, mitigates the inflammatory response in vitro and in vivo. These properties were initially attributed to specific bacterial surfac...
Aug 31, 2020
Laguerre, Sandrine, 2020, "MINTIA paper Simulated data", https://doi.org/10.15454/TJC6SP, Portail Data INRAE, V1
90 sets of reads associated to the 45 simulated fosmids used in MINTIA paper (extraction of 15 sets of sequence from 3 genomes x 2 sequencing machines)
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne; Grynberg, Pirsicila; Togawa, Roberto, 2020, "PPN-specific candidate effectors expressed in endophytic phases of M. incognita parasitic life cycle", https://doi.org/10.15454/WBZZ5M, Portail Data INRAE, V1, UNF:6:Q6V0cPfaBNCHOg5KABL/1g== [fileUNF]
Annotated list of M. incognita candidate effector proteins that fulfil these criteria: - the proteins are PPN-specific according to orhtofinder and return no significant hit over than in other PPN against the NCBI's nr. - the protein does not belong to a multigene family - the co...
Aug 18, 2020 - Genes specific to phytoparasitic nematodes INRAE/EMBRAPA
Danchin, Etienne; Grynberg, Priscila; Togawa, Roberto, 2020, "Annotated list of species used in this study", https://doi.org/10.15454/IIAQOW, Portail Data INRAE, V1
Annotated list of the 63 species used in the Orthofinder comparative analysis of nematodes (61 species) and two tardigrade species as out-groups. Description: Lines 1-64, definition of columns - Abbrev Species: abbreviated species name. Species identifiers used in all the Orthofi...
Aug 5, 2020
Ehrenmann, Francois; Plomion, Christophe, 2020, "Oak Genome Sequencing Website", https://doi.org/10.15454/WSMRIN, Portail Data INRAE, V2
The oak genome sequencing website, concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees, is a permanent resource by INRAE, available at http://www.oakgenome.fr/. It provides access to various resources : oak genome b...
Jul 24, 2020 - SPOmics
Monachello, Dario; Lurin,Claire; Vert, Gregory, 2020, "InterATOME protein-protein interactions from Vert, Gregory (Lysine-63 Polyubiquitin Networks)", https://doi.org/10.15454/ZKPXKS, Portail Data INRAE, V2
This dataset provides the results of two systematic large-scale yeast two-hybrid screenings of the Arabidopsis thaliana InterATOME library with the Arabidopsis Ubiquitin-conjugating enzymes-E2s (UBC35/36-UEV1A/B/C/D) and their –interacting Ub-ligases E3s.
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