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1 to 10 of 40 Results
Jan 22, 2021 - Chemometrics-Chemhouse
Mallet, Alexandre; Pérémé, Margaud; Charnier, Cyrille; Roger, Jean-Michel; Steyer, Jean-Philippe; Latrille, Eric; Bendoula, Ryad, 2021, "On-site substrate characterization in the anaerobic digestion context: a dataset of near infrared spectra acquired with four different optical systems on freeze-dried and ground organic wastes", https://doi.org/10.15454/SQQTUU, Portail Data INRAE, V1
The near infrared spectra of thirty-three freeze-dried and ground organic waste samples of various biochemical composition were collected on four optical systems, including a laboratory spectrometer (Buchi FT-NIR NirFlex N-500), a transportable spectrometer (ARCoptix FT-NIR Rocke...
Jan 22, 2021 - HYCAR
Piazzi, Gaia; Delaigue, Olivier, 2021, "airGRdatassim: Suite of Tools to Perform Ensemble-Based Data Assimilation in GR Hydrological Models. R package version 0.0.3.22.", https://doi.org/10.15454/WEYYVZ, Portail Data INRAE, V1
Add-on to the 'airGR' package which provides the tools to assimilate observed discharges in daily GR hydrological model. The package consists in two functions allowing to perform the assimilation of observed discharges via Ensemble Kalman filter or Particle filter.
Jan 12, 2021
Allart, Roland; Ricci, Benoît; Poggi, Sylvain, 2020, "R package alm : Automated Landscape Mapping", https://doi.org/10.15454/AKQW7Y, Portail Data INRAE, V2
R package 'alm' : R code and associated shiny application dedicated to the automated mapping of landscapes. The package 'alm' allows users to select and combine layers of geographical information (shapefiles) to map the land covers of a specified buffer or set of buffers.
Jan 11, 2021
Plancade, Sandra, 2021, "A stochastic process modelling of phyllochron : script and experimental data from the ITEMAIZE project", https://doi.org/10.15454/CUEHO6, Portail Data INRAE, V1, UNF:6:qoCrkWne08EUiI/jSov3ow== [fileUNF]
R script and data to implement the phyllochron model in Plancade et al (2021). See details in Readme.txt.
Dec 22, 2020
Dérozier, Sandra; Nicolas, Pierre; Mäder, Ulrike; Guérin, Cyprien, 2020, "Genoscapist", https://doi.org/10.15454/OMDLOD, Portail Data INRAE, V2
Genoscapist is a web-tool generating high-quality images for interactive visualization of hundreds of quantitative profiles along a reference genome together with various annotations.
Dec 17, 2020 - ELDAM
Coste, Gustave; Biard, Yannick; Roux, Philippe; Hélias, Arnaud, 2020, "ELDAM: A Python software for Life Cycle Inventory data management", https://doi.org/10.15454/6EKXJQ, Portail Data INRAE, V1
Source code of ELDAM (ELsa DAta Manager), a software developed in Python to manage Life Cycle Inventory (LCI). The purpose of ELDAM is to allow better LCI documentation, archiving and exchange by providing a user-friendly, spreadsheet based interface and a complete review procedu...
Dec 10, 2020 - Experimental - Observation - Simulation Dataverse
Haug, Benedikt, 2020, "Simulation Code for comparison of uni- and bivariate analysis in mixed cropping experiments", https://doi.org/10.15454/33S25W, Portail Data INRAE, V1, UNF:6:hFfv2zYHlDnBa/66IZEF+A== [fileUNF]
Simulation code for Haug, Benedikt, Monika M. Messmer, Jérôme Enjalbert, Isabelle Goldringer, Emma Forst, Timothée Flutre, Tristan Mary-Huard, and Pierre Hohmann. “Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept”, Manuscript subm...
Dec 10, 2020 - Experimental - Observation - Simulation Dataverse
Haug, Benedikt, 2020, "Simulation Code for comparison of four different experimental designs in mixed cropping experiments", https://doi.org/10.15454/VKKIBU, Portail Data INRAE, V1, UNF:6:hFfv2zYHlDnBa/66IZEF+A== [fileUNF]
Simulation code for Haug, Benedikt, Monika M. Messmer, Jérôme Enjalbert, Isabelle Goldringer, Emma Forst, Timothée Flutre, Tristan Mary-Huard, and Pierre Hohmann. “Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept”, Manuscript subm...
Dec 8, 2020 - ThaliaDB maize Dataverse
Nicolas, Stéphane; Madur, Delphine; Charcosset, Alain; Bauland, Cyril; Combes, Valérie; Berard, Aurélie; Arca, Mariangela; Mary-Huard, Tristan; Le Paslier, Marie-Christine; Gouesnard, Brigitte, 2020, "Fluorescence intensity datasets and R scripts to predict allelic frequencies in DNA bulks using maize 50K Illumina array", https://doi.org/10.15454/GANJ7J, Portail Data INRAE, V1, UNF:6:IvZiMGs4Oo8oWZqgBbcDdA== [fileUNF]
R scripts and fluorescence intensity datasets of 24 controlled pools and 327 inbred lines panels extracted from 50K Illumina Infinium HD array (Ganal et al., 2010). These datasets and R scripts can be used to calibrate a model to predict allelic frequencies in new DNA bulks using...
Dec 7, 2020 - Omics Dataverse
Fort, Tania; Pauvert, Charlie; Zanne, Amy; Ovaskainen, Otso; Caignard, Thomas; Barret, Matthieu; Compant, Stéphane; Hampe, Arndt; Delzon, Sylvain; Vacher, Corinne, 2020, "Bioinformatic and statistical scripts to analyze metabarcoding data of fungal communities", https://doi.org/10.15454/0CNFWS, Portail Data INRAE, V3, UNF:6:+ROFl+GYxv+1vFHcrzj8MA== [fileUNF]
This dataset contains R-scripts to analyse the diversity and composition of seed fungal communities (Fort et al., Maternal effects shape seed fungal communities in Quercus petraea. Submitted). The bioinformatic script was applied to raw sequences after paired-end sequences were j...
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