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subtreePaths: /13/14 Type: (files) Access: Public

1 to 10 of 404 Results

FruitBreedomics_apple_320K_SNP.bed Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset application/vnd.realvnc.bed - 110.7 MB - MD5: 13e72da9866dca4147500ee5afe611e3 FruitBreedomics_apple_320K_SNP.bed: 320K genotyping matrix. Genotyping of 320,761 SNP loci on 1447 apple genotypes obtained using the Axiom®Apple480K array. Filtering of SNPs is described in the Supplementary_methods document associated with Jung et al (2020) and relied mainly on...
FruitBreedomics_apple_320K_SNP.bim Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset application/octet-stream - 9.5 MB - MD5: 8bb9baa0ec46e11cc63af66a03770ef2 FruitBreedomics_apple_320K_SNP.bim: description of the 320,761 SNP loci genotyped using the Axiom®Apple480K array: position on GDDH13 v1.1 reference genome (Daccord et al 2017) together with reference and alternative alleles.
FruitBreedomics_apple_320K_SNP.fam Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset application/octet-stream - 27.9 KB - MD5: 370f98057ff1fe58abfe00a2c6bea541 FruitBreedomics_apple_320K_SNP.fam: identifiers of apple genotypes, under the form of their Malus UNiQue genotype code (MUNQ) for the 1355 accessions or their within-progeny identifier for the 92 apple progeny individuals. The MUNQ codes are also listed in the dataset “MUNQ - Mal...
FruitBreedomics_apple_material_description_v2.tab Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset text/tab-separated-values - 133.2 KB - MD5: 9541600b34cb2dfd082f76e6c654bc83 FruitBreedomics_apple_material_description_v2.txt list of the 1447 unique Malus x domestica genotypes analyzed, with the name attributed to the MUNQ (MUNQ_Preferred_name), the ploidy level (Ploidy), the accession number of the accession used to represent the MUNQ in genotyping (A...
Submit_Synteny_Legumineuse_V3.xlsx Jan 5, 2021 - PlantSyntenyViewer Legumes submission file application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 18.9 MB - MD5: 78903f4faa0a6f59194ea61f2347ac08
Submit_Synteny_Brassicaea_V2.xlsx Jan 5, 2021 - PlantSyntenyViewer Brassicaea submission file application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 51.1 MB - MD5: 34eaf8e1bb522ce21bdae713c3b6a174 Submission file of Brassicaea botanic family (8 proto-chromosomes) in PlantSyntenyViewer
Submit_Synteny_SolanaceaeV1.xlsx Jan 5, 2021 - PlantSyntenyViewer Solanaceae submission file application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 5.5 MB - MD5: 46a42154af680dd07f9e1d53b470f1e5 Submission file of Solanaceae botanic family (17 proto-chromosomes) in PlantSyntenyViewer
Submit_Synteny_Rosaceae_V1.xlsx Jan 5, 2021 - PlantSyntenyViewer Rosaceae submission file application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 2.2 MB - MD5: ff5b84ac361e4e32814e6f779b93d0f0 Submission file of Rosaceae botanic family (9 proto-chromosomes) in PlantSyntenyViewer
Submit_Synteny_Cucurbitaceae_V2_corrected_final.tab Jan 5, 2021 - PlantSyntenyViewer Cucurbitaceae submission file text/tab-separated-values - 4.5 KB - MD5: bb40a75bd36086df37059a2d683ae846 Submission file of Cucurbitaceae botanic family (22 proto-chromosomes) in PlantSyntenyViewer
Submit_Synteny_15.2_syntenome_blé.xlsx Jan 5, 2021 - PlantSyntenyViewer Wheat dataset submission file application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 2.5 MB - MD5: 32dbb1ea9b252592d4f5bf3c128a9fba Submission file of Wheat dataset in PlantSyntenyViewer

FruitBreedomics_apple_320K_SNP.bed

Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset

application/vnd.realvnc.bed - 110.7 MB - MD5: 13e72da9866dca4147500ee5afe611e3

FruitBreedomics_apple_320K_SNP.bed: 320K genotyping matrix. Genotyping of 320,761 SNP loci on 1447 apple genotypes obtained using the Axiom®Apple480K array. Filtering of SNPs is described in the Supplementary_methods document associated with Jung et al (2020) and relied mainly on...

FruitBreedomics_apple_320K_SNP.bim

Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset

application/octet-stream - 9.5 MB - MD5: 8bb9baa0ec46e11cc63af66a03770ef2

FruitBreedomics_apple_320K_SNP.bim: description of the 320,761 SNP loci genotyped using the Axiom®Apple480K array: position on GDDH13 v1.1 reference genome (Daccord et al 2017) together with reference and alternative alleles.

FruitBreedomics_apple_320K_SNP.fam

Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset

application/octet-stream - 27.9 KB - MD5: 370f98057ff1fe58abfe00a2c6bea541

FruitBreedomics_apple_320K_SNP.fam: identifiers of apple genotypes, under the form of their Malus UNiQue genotype code (MUNQ) for the 1355 accessions or their within-progeny identifier for the 92 apple progeny individuals. The MUNQ codes are also listed in the dataset “MUNQ - Mal...

FruitBreedomics_apple_material_description_v2.tab

Jan 22, 2021 - FruitBreedomics apple high-density SNP genotyping dataset

text/tab-separated-values - 133.2 KB - MD5: 9541600b34cb2dfd082f76e6c654bc83

FruitBreedomics_apple_material_description_v2.txt list of the 1447 unique Malus x domestica genotypes analyzed, with the name attributed to the MUNQ (MUNQ_Preferred_name), the ploidy level (Ploidy), the accession number of the accession used to represent the MUNQ in genotyping (A...

Submit_Synteny_Legumineuse_V3.xlsx

Jan 5, 2021 - PlantSyntenyViewer Legumes submission file

application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 18.9 MB - MD5: 78903f4faa0a6f59194ea61f2347ac08

Submit_Synteny_Brassicaea_V2.xlsx

Jan 5, 2021 - PlantSyntenyViewer Brassicaea submission file

application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 51.1 MB - MD5: 34eaf8e1bb522ce21bdae713c3b6a174

Submission file of Brassicaea botanic family (8 proto-chromosomes) in PlantSyntenyViewer

Submit_Synteny_SolanaceaeV1.xlsx

Jan 5, 2021 - PlantSyntenyViewer Solanaceae submission file

application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 5.5 MB - MD5: 46a42154af680dd07f9e1d53b470f1e5

Submission file of Solanaceae botanic family (17 proto-chromosomes) in PlantSyntenyViewer

Submit_Synteny_Rosaceae_V1.xlsx

Jan 5, 2021 - PlantSyntenyViewer Rosaceae submission file

application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 2.2 MB - MD5: ff5b84ac361e4e32814e6f779b93d0f0

Submission file of Rosaceae botanic family (9 proto-chromosomes) in PlantSyntenyViewer

Submit_Synteny_Cucurbitaceae_V2_corrected_final.tab

Jan 5, 2021 - PlantSyntenyViewer Cucurbitaceae submission file

text/tab-separated-values - 4.5 KB - MD5: bb40a75bd36086df37059a2d683ae846

Submission file of Cucurbitaceae botanic family (22 proto-chromosomes) in PlantSyntenyViewer

Submit_Synteny_15.2_syntenome_blé.xlsx

Jan 5, 2021 - PlantSyntenyViewer Wheat dataset submission file

application/vnd.openxmlformats-officedocument.spreadsheetml.sheet - 2.5 MB - MD5: 32dbb1ea9b252592d4f5bf3c128a9fba

Submission file of Wheat dataset in PlantSyntenyViewer

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